Cardinium endosymbiont of Oedothorax gibbosus: CAOE_0017
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Entry
CAOE_0017 CDS
T08548
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ceng
Cardinium endosymbiont of Oedothorax gibbosus
Pathway
ceng03030
DNA replication
ceng03430
Mismatch repair
ceng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ceng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAOE_0017 (dnaX)
03430 Mismatch repair
CAOE_0017 (dnaX)
03440 Homologous recombination
CAOE_0017 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ceng03032
]
CAOE_0017 (dnaX)
03400 DNA repair and recombination proteins [BR:
ceng03400
]
CAOE_0017 (dnaX)
Enzymes [BR:
ceng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAOE_0017 (dnaX)
DNA replication proteins [BR:
ceng03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CAOE_0017 (dnaX)
DNA repair and recombination proteins [BR:
ceng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CAOE_0017 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_30
AAA_22
AAA_5
DNA_pol3_gamma3
AAA_14
Mg_chelatase
Rad17
RCF1-5-like_lid
nSTAND3
AAA_19
AAA_16
AAA_7
AAA_18
AAA_24
AAA_2
VapE-like_dom
Ring_hydroxyl_B
AAA_assoc_2
DciA
RNA_helicase
AAA_33
AAA_28
Motif
Other DBs
NCBI-ProteinID:
CAH2559589
UniProt:
A0A8X6GDZ3
LinkDB
All DBs
Position
1:complement(20502..22265)
Genome browser
AA seq
587 aa
AA seq
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MSQFVVSARKYRPTTFKDVISQPHITTTLKNAIASGQLAHAFLFCGPRGVGKTTCARILA
KAINCLQVTEAIEPCNQCTNCISLSSNSFMNVHELDAASNNSVEDIRDLVGQVRYAPQLG
KYKIYIIDEVHMLSNAAFNAFLKTLEEPPSYALFILATTERHKVLPTILSRCQIFNFNRI
KLEDIVTQLKTISRQESIPYEESALQLIAQKAEGAMRDALSMFDLLTTSAGRGGTITYAH
TCDHLQILDYDYYFKCTEAFLQGNIPAVLSLYDAVLRAGFNGHHFVVGLGEHLRNLLVCK
DNATIPLLEVTDNIRPRYAEYASKCTMPFLLQALGRLNQCDVGYKSSQHQRLHVELALIE
LATSHLSVPESTVEPLPDTPLPKADGQKEPVIAKSKQADVVATGSSTPLAKSSPIAVHSS
SKPVGPAQKPETITIPTLANLKSGLTARKKSNDTDKKIASQYDIKVKEPVSETMVQSFLA
DYSEQLKKNGHITAYHLMNQPIKIQGAVITISLINPVQEQMLQNLKEELLPALRKKLHHP
DITIQSALIEQTSAQTPYTDQEKLTYLSKKNTAIALLQERLMLEVVY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatttgtagtttctgcaagaaaataccgccctactacttttaaagatgtgatt
agtcagccccatattactaccacattaaagaatgccatagcatctggtcagcttgcacat
gcttttcttttttgtggtccgcgtggtgtggggaaaactacttgtgcgcgtatactggcc
aaggccatcaattgcttacaagttacggaagcaatagagccctgtaaccagtgcaccaat
tgtataagcttaagcagcaacagttttatgaatgtccatgagttggacgcagcttctaat
aattctgtagaggatattcgtgatctggtgggacaggttcgctatgcccctcaactgggt
aaatataagatatacattatagacgaggtccatatgttgtctaatgcggcctttaatgcg
tttctcaaaacgcttgaagaaccccctagttatgccctatttatattggctaccacagaa
cgccacaaagttttacctactattttatctcgttgtcaaatctttaactttaatagaatt
aaattagaagatattgtcacacaactcaaaacaatttccaggcaagagtctattccttat
gaagaatctgcgctgcagctaattgcacaaaaagcagaaggtgccatgcgggatgcactc
tctatgtttgatctgctcactacttctgcaggcagaggaggcactattacctacgcccac
acatgcgaccatctccaaattctggattatgactattattttaaatgcacagaagctttc
ttacaaggaaatattcccgctgtcctctccctctatgacgccgtcctacgtgcaggtttt
aatgggcaccattttgtagtaggacttggagaacatttacgcaacctattggtctgtaaa
gacaatgctaccatccctcttttagaagtcacggacaacattcgtccacgttatgctgaa
tatgcttctaaatgcacgatgccttttttattacaagcgttaggacgcttaaaccaatgt
gatgtaggctataaatctagccaacatcaaaggttgcatgtagaactggcactaattgaa
ctagccactagccatttgtctgttccagaaagcactgtagaaccattaccagatacaccg
ttaccaaaagcagatggtcaaaaagagcctgttatagcaaagtctaagcaagcagatgtt
gttgccactgggtcatctacgccactggctaagtcaagccctattgcggtccattcatcc
tccaagccagtagggcctgctcagaaaccagaaacgataacgattcctaccttagcaaac
ttaaaatctggattgactgcaaggaaaaaatcgaatgataccgataaaaaaatagcaagc
caatatgatataaaagtaaaagaaccagtttcagaaacaatggttcaatctttccttgct
gattatagcgagcaacttaaaaaaaatggccacataacagcttatcaccttatgaatcag
cccataaagattcaaggtgcggtgattaccatttcattgatcaatcccgttcaagagcag
atgctacaaaatctcaaagaggagcttttacctgcacttcgaaaaaaattacatcaccct
gatataaccattcaaagtgctttgatcgagcagacatctgcccaaacaccctatacagat
caagaaaaattaacctacttgagtaaaaaaaacactgctatagcactactccaagaacga
cttatgttggaggtggtgtactaa
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