Cardinium endosymbiont of Oedothorax gibbosus: CAOE_0076
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Entry
CAOE_0076 CDS
T08548
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ceng
Cardinium endosymbiont of Oedothorax gibbosus
Brite
KEGG Orthology (KO) [BR:
ceng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ceng03032
]
CAOE_0076 (topA)
03400 DNA repair and recombination proteins [BR:
ceng03400
]
CAOE_0076 (topA)
Enzymes [BR:
ceng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CAOE_0076 (topA)
DNA replication proteins [BR:
ceng03032
]
Prokaryotic type
DNA Topoisomerases
CAOE_0076 (topA)
DNA repair and recombination proteins [BR:
ceng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CAOE_0076 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
GIT_CC
Motif
Other DBs
NCBI-ProteinID:
CAH2559632
UniProt:
A0A8X6H2S5
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Position
1:complement(90745..93075)
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AA seq
776 aa
AA seq
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MAKNLVIVESPAKAKTIERYLGSNYQVASSNGHIRDLMKGNNAINIEQGFLPSYEISPGK
ERVVQYLKKLAHSSDCVYLASDDDREGESISWHLKEALKLKDEKVQRIVFREVTKMAVLN
AFKQPRTIDLALVDSQQARRVLDRLVGYDLSPLLWKKIKPGLSAGRVQSVAVRMVVERER
AIDRFVATSNFAVAAFFILPTGQLLKADGGEKFKTEEEAFAFLEKCKGAIFSIKALDTKA
LKRSPSPPFTTSTLQQEASRKLGYSVNRTMVLAQQLYETGKISYMRTDSVNLSQEAIQNI
SEMVSTTYGAAYFQARSYTTKSSTAQEAHEAIRPTDFSLKVASSRKDEQRLYELIWCRAM
AAQMADAQIEKTIATIQISTTDQPLIATGEVLKFEGFLKAYIRDQVNEEASDDAKTMLPS
LHIGQELCLEKMLARERFTNPPARYTEATLVRDLEEKEIGRPSTYAPIIATIQKRGYIKM
ESREGFLRAYRLLTLQNNLIHKEKLTEIVRTEKQKLFPTDMAAVVNDFLVKHFSDITDYN
FTAHVEKELDKIAQGTKIWNQMLSEFYSGFYPKVQATAGIDRSMVKYTRLLGKDPVTHAS
VMVRLGKYGPLVQLGIEADGHEEAPRFAGLRANQRMETITLEEALELFKLPRVVGTFETL
PLMINIGRFGPYIKHGSLFYSIPKTDDPFAINEQGAIAIIEAKRKADAEKLIKTFAEAPT
IQILNGKWGAYIKNGKNHTRIPKDIADPRLLSFEECLNILGNNTKSKKSKKSTMAC
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatctagttattgttgagtcacctgcaaaagccaaaacgatcgaacgttac
ctaggcagtaactatcaagtagcttcctcaaatggtcatattagagaccttatgaagggc
aataatgctattaacattgagcaagggtttttgcctagttatgaaatcagccctggaaag
gaaagggtagtacagtaccttaaaaagttggcccatagctctgattgtgtctatttagct
agtgatgatgaccgagaaggagaatctatttcgtggcatttaaaagaagcgctgaagtta
aaggatgaaaaggtgcaacgcattgtttttagagaagttactaaaatggctgtattaaac
gcattcaagcagccgcgtaccatcgacttagctttagttgactcacagcaagccaggcgt
gttttagacagattagtaggctatgatttatcgccattattgtggaaaaagattaaacca
ggcctttctgcaggccgtgtacaatctgttgcggtaaggatggtcgtagagcgagaaaga
gcgattgatcgctttgttgcaacttctaactttgcggtggctgctttttttattctaccg
acgggacaattattgaaagcagatggtggagagaagtttaaaacggaggaagaagctttt
gcatttttagaaaaatgcaaaggagcaatcttctccattaaagcattggatacgaaagca
ttaaaacgatctccctctcctccttttacaacctctactttacagcaagaggctagtaga
aagcttggctattctgtcaaccgtacgatggtactggctcaacagctctatgaaacaggt
aaaatttcttatatgaggacagactctgtaaatctttcacaagaggccatacaaaatata
tcggaaatggtctccacaacctatggagctgcctatttccaggctagaagttatacgact
aaatcatccactgcacaagaagctcatgaagcgatacgacctactgatttttcactaaaa
gtagccagtagccgtaaagatgaacaacggctatatgaactcatttggtgtagggctatg
gctgctcagatggctgatgcacaaatagaaaaaaccatagcaaccattcaaatctctact
acagaccaaccactgatcgcaacaggagaagtattgaaatttgaaggctttctaaaggca
tacatacgcgaccaagtgaatgaagaagcgtcagatgatgccaaaacgatgttgccatca
ctccatataggccaggaactttgcttagagaaaatgttggccagagaacgattcactaat
ccgcctgctcggtatactgaggccactttggttagagatttagaagaaaaggaaattgga
cgtccatctacctatgcacccattattgccactattcagaaaagagggtatattaagatg
gagtctcgtgaaggctttctacgcgcctataggttattaacactacaaaataacctgatt
cataaagaaaaactaactgaaatcgttcgcacagagaaacaaaagctttttcccaccgat
atggctgcggtggtcaatgactttttggtcaaacacttttctgatataaccgactataat
tttaccgcacatgtggaaaaagagctggataaaattgcacaaggtactaaaatttggaat
cagatgttaagtgaattctatagcggcttttatcctaaagttcaagctacggctggtata
gaccgctctatggtaaaatatactagacttttaggaaaagatccagtaacccatgcttcc
gtaatggttcgattaggtaaatatggtccattggttcagttaggcatcgaagcagatggc
catgaggaagcgcctcgttttgcaggactacgggccaatcagcgtatggaaacgattacg
ttagaagaggccttagaactttttaaactaccacgtgtagtggggacatttgaaacgctg
ccactgatgatcaacataggtagatttggtccctacattaaacatggttccctattctat
tccatacccaaaacggatgatccatttgcaattaatgaacagggagccatagccattatt
gaagccaaacggaaagcagatgctgaaaagctgatcaaaactttcgctgaagcacccacc
atacaaattttaaacgggaaatggggggcctatattaaaaatggtaaaaaccatacccgt
attcctaaagacattgcagatcctaggttactcagtttcgaggaatgtttaaacattttg
ggaaacaatacaaaatcaaaaaaaagtaaaaaaagcactatggcttgctga
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