Cardinium endosymbiont of Oedothorax gibbosus: CAOE_0157
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Entry
CAOE_0157 CDS
T08548
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ceng
Cardinium endosymbiont of Oedothorax gibbosus
Brite
KEGG Orthology (KO) [BR:
ceng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ceng03009
]
CAOE_0157 (rluD)
Enzymes [BR:
ceng01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CAOE_0157 (rluD)
Ribosome biogenesis [BR:
ceng03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CAOE_0157 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF1062
Motif
Other DBs
NCBI-ProteinID:
CAH2559696
LinkDB
All DBs
Position
1:185643..186671
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AA seq
342 aa
AA seq
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MKDYPLPETLFTEYVVTVTKEQSNLRIDKFLSDILQISRNKIQEAIANRSISVNRHFIKS
NYMVQPEDEIVAHIPKPIDAATLTPETIPLDIVYEDDHLLVVYKPAQMVVHPDTAHRTGT
LAHGLLYRYKHLPLKDNMPTRPGLVHRIDKNTSGLLVVAKTAESLVALTRQFYNHTVTRT
YYTLVWSNPQNEIGTIDINIGKDSHNHQKISAFPDNQQGKRAVTHYQVIKRLHHVALVAC
RLETGRTHQIRVHMQHIGHPVFGDPQYGGDVIASGERYASYKAFVHNCFKLMPYQALHAA
VLGFKHPVTEAAISFEAPLPENFIKLIEKWEKYVTSSSHHVA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaagattatcctctacctgaaacactttttacggaatatgtcgttaccgttacaaag
gaacagtctaatctccgtatagacaaatttttatcagacattttacaaatcagtcgaaat
aaaatccaagaggcgattgccaatcgatcgatttccgtcaatagacattttatcaagtcg
aattatatggtacagcctgaagacgaaatagtagcgcatatccctaaacccattgatgca
gccacacttactccagaaacgataccattggatattgtatatgaagatgaccacctactt
gttgtttataaaccggcccaaatggtcgtacatccggatacagcccatcgaaccggaacg
ttagcccatggactattgtatcgctataagcatttgcctttaaaagacaatatgcccacc
aggcctggcttggtacatcggattgataaaaacacatcaggtctattggtagtggccaaa
acagcggagagcttggtagctttgacccgtcaattctataatcataccgtaacacgaacc
tattatacattggtctggagcaatccccaaaatgagatcggcacgattgatatcaatata
ggtaaagacagccataaccatcaaaaaatatcagcttttccagacaatcaacaaggtaaa
agagccgttacccattatcaagtgatcaagcgactacaccatgttgcccttgtagcctgt
agattagaaacaggacgcacccatcaaattcgcgtgcatatgcaacatataggccaccct
gtctttggtgatcctcaatatggcggcgatgtaattgctagtggcgagcggtatgcctcc
tataaggcctttgtacataattgttttaaactaatgccttaccaggcactccatgcagct
gttcttggatttaagcaccctgtaacagaagcagccatctcctttgaagcccctttacca
gaaaactttattaaactgatagagaaatgggaaaaatatgtaacatccagtagccaccat
gttgcataa
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