Cardinium endosymbiont of Oedothorax gibbosus: CAOE_0425
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Entry
CAOE_0425 CDS
T08548
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ceng
Cardinium endosymbiont of Oedothorax gibbosus
Pathway
ceng03030
DNA replication
ceng03430
Mismatch repair
ceng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ceng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAOE_0425 (dnaE)
03430 Mismatch repair
CAOE_0425 (dnaE)
03440 Homologous recombination
CAOE_0425 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ceng03032
]
CAOE_0425 (dnaE)
03400 DNA repair and recombination proteins [BR:
ceng03400
]
CAOE_0425 (dnaE)
Enzymes [BR:
ceng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAOE_0425 (dnaE)
DNA replication proteins [BR:
ceng03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CAOE_0425 (dnaE)
DNA repair and recombination proteins [BR:
ceng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CAOE_0425 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
CAH2559886
UniProt:
A0A8X6EP64
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All DBs
Position
1:516276..519713
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AA seq
1145 aa
AA seq
DB search
MHNFCHLHCHTEYSLLDGAAKVERLIVANKQLGMNALAITDHGNMFGVPQFVAAAAKEGV
KPIIGGEFYMAPDRHDHKDKTRYHQLLLAKNAIGYQNITKLCSLGFLEGYYYKPRIDKAL
LKQCKEGLIATTCCLGAEIPKTIIRHGETVAEKLFLEWLDLFGEDYYIELQRHGIKEQEI
CNAVLLRWAEKYNVKVIATNDVHYIAQQDSLAQDVLLCLQTGKDYNDPNRMRFSNDQFFL
KSPEEMALLFADVPAAVTNTLALVENIETPSLTRDVLLPIFQLPDGFSDPNLYLTHLAFS
GARAKYGTISMEVESRLNYELAIIAQTGFAGYFLVVQDFIEAAVQLGVIVGPGRGSVAGS
LVAFCIGITKIDPLRYNLLFERFLNPERISMPDIDVDFDDEGRKKVIDYVIQKYGRNQVA
SIITFGSMAAKSAIRDVARVLGIPLARANYLTKLIPNKLGITLSEAFEEVKELAEIKKAI
ATPEGKVLDLAETLEGLVRHTGIHAAGIIIAPNDIVEYIPVKTDKNSDLLVTQYDGSVLE
GLGMLKIDFLGLKTLSIIKDALLLIEQNRGITIDIDRIPLDDPITFKLYQSGNTKGTFQF
ESEGMRQWLFKLQPTTMEELIAMNALYRPGPMQFIPNFIARKHGKEPIEYPYPLLEAILK
PTYGIMIYQEQIIQTAQAMAGYTLGGADLLRKAMGKKNAAEMARQRDIFVTGAVQKHKIL
KEKALAVFEIMEKFAQYGFNRSHAAAYSLIAYQTAYLKAHYPTEYMAAVLTHNQGDIEKI
AFFMEESRQQGLSVLGPDINESQVNFSAGLHKEIRFGLGAIKGAGASAVTAIIEARAQKG
AFKDIFDFLESIQLKTVNKKTMEALALSGAFDTFKAVHRRQYVYGVSGSSFIEKVIQYRN
RIQKERMEALQSLFAASAHSHIKRPEPADCAPYEPLEQLRIEKELVGFYISGHPLDPFKV
DIENFCNVTTQNILTASRKAVTIAGMLTASTIKQNGKGNAFALLTLDDYHGSLNFALFGE
DYLKYKHLLEVGTLLFLTGHVAPRYGNQEMQTFKPQTINLLEEIRERMAQGVHLKLAQHH
VNPPLVHELESCIKRYPGKSFIKISIIDHEAQITIPTCSTQYRVELNNELFELFNQLSID
FHLFA
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgcataacttttgtcatttacattgccatacagaatattccctgttggatggcgcagcc
aaggtagagcgtttaatagtagccaataaacagttgggcatgaatgcattggccattaca
gaccacggcaatatgtttggtgtgcctcagttcgtagccgcagcagccaaggaaggggta
aaacccattatagggggtgaattttatatggcacctgatcggcacgaccataaagataaa
acccgttaccaccagctgttgttggctaaaaatgccataggctatcaaaatattaccaaa
ctatgttccctaggttttttagaaggttattattataagccacgcattgataaggcttta
ctcaaacaatgcaaagaaggcttaatcgccactacctgttgcttaggtgcagaaattcct
aaaaccattattcgacacggggaaacagttgcagaaaagctctttttagaatggttggac
ctatttggtgaagattattatatagaactacaaagacatggcattaaggaacaagaaatt
tgtaatgccgtattactgcgttgggctgaaaaatataatgtaaaagtcattgctaccaac
gatgtccattacattgcgcaacaagacagtcttgctcaggatgtattgctctgtttgcag
actggaaaagattacaatgaccccaatcgtatgcgttttagcaacgatcaattcttttta
aagtcaccagaagagatggctctgctttttgcagatgtgccagctgctgttaccaatacc
ctagcattggtagaaaacatagaaacaccctccttaacccgcgatgtgctgctgcctatt
tttcaacttcctgacggtttttcagatcccaatctctatttaacccatttggctttttct
ggggcccgagccaagtatgggaccatttctatggaagtagaaagtagactgaattatgaa
ttggccattattgcccaaaccggttttgccggttattttttagtcgtacaagactttatt
gaagcggctgtacaattaggtgtaatcgtaggaccagggcgcggctctgtagcaggttcg
ttagtcgctttttgtatagggattaccaaaatagatccccttcgctataatctacttttt
gaacgctttttaaatccagagcggatctccatgcccgatatagatgtagactttgatgat
gaaggtcgtaaaaaagtaattgattatgtaattcaaaaatatggtagaaaccaagttgct
tccattatcacctttggtagtatggcagctaaatctgccatacgtgatgtggcgcgtgta
ttaggcattcctttggcacgggccaactatctcaccaagttgataccaaacaaattaggc
attacgttatcagaagcctttgaggaggtaaaagaactggctgagatcaaaaaagccatt
gccactccagaaggtaaagtgctcgatttggctgaaaccttagaagggctggtgcgccat
acaggtattcatgcagcaggcatcatcattgcacccaatgatattgtagaatatatcccg
gtaaaaacagataaaaattctgacttattggttacccaatatgatgggtcggtactggaa
ggactgggtatgttaaaaatagattttttagggctcaaaacgcttagcattattaaagat
gcactgctattaattgagcaaaatagaggcattaccatagatatagatcgcatcccatta
gacgaccctattacgtttaaactataccaatctggtaataccaaaggaacctttcaattt
gagtcagaaggcatgcgccaatggctgtttaaactgcaacccaccacgatggaggagctt
attgccatgaatgccctctataggccaggccccatgcagtttattcctaattttattgcc
cgtaaacatggcaaagaacccattgaatatccttatccacttttggaagccattctaaag
cccacttatggtattatgatttaccaagagcaaatcatacaaacggcacaagccatggca
ggttataccctagggggtgccgatttattgcgcaaggccatgggtaaaaaaaatgcagca
gaaatggctaggcaacgcgatatctttgtaacaggtgcagtccaaaaacataagatcctt
aaagaaaaagcattggctgtttttgagattatggaaaaatttgcgcaatatggttttaat
cgttcgcatgcagcggcttattcccttattgcttaccaaactgcttatttaaaggcccat
taccctaccgaatatatggctgctgtattgacccataaccagggcgatattgaaaaaatt
gctttctttatggaagaaagccgccagcaaggactctctgtattaggacctgatataaat
gaaagtcaagtcaattttagtgctggcctccataaagaaatacgatttggactaggtgcg
attaaaggagctggtgcgtcagctgttaccgctattatagaagcaagagcgcagaaaggc
gcttttaaagatatctttgatttcttggaatctatccaacttaaaaccgtgaacaagaaa
accatggaagcgcttgccttatcgggtgcttttgatacctttaaagcggtacatagaagg
cagtatgtctatggagtgtcaggtagcagctttatagaaaaagtcatacaatatcgcaat
cgtattcaaaaagagcggatggaagcccttcaatcgctttttgcagccagtgcccatagt
cacattaaaaggccagaacccgctgattgtgcgccttatgagccgttggaacaattgcgt
atagagaaagaactggttggtttttatatttctggtcatccactcgatccatttaaagtg
gatatagaaaacttctgcaatgtaaccacacaaaatatattaaccgctagtcgaaaagcc
gtaaccatagcgggtatgcttaccgcctctaccattaagcaaaatggaaaaggcaatgct
tttgctttactcacattagatgattatcatggctcgcttaactttgcactttttggagaa
gactacttaaaatacaaacatctattagaagtcggcacattactcttccttacaggccat
gtagccccacgctatgggaaccaagaaatgcaaacctttaaaccccaaaccattaacctg
ttggaagagattcgggaaagaatggctcaaggggtccatttaaagctagcacaacaccat
gtcaatccaccattggtgcatgaattggaatcttgtatcaaacgttatccaggcaaatct
tttataaagatatcgatcatagatcatgaagcgcaaatcaccattccaacatgctctacc
caataccgtgtcgaactcaacaatgaactatttgaattattcaaccagctgtctatagat
tttcacctatttgcctaa
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