Cardinium endosymbiont of Oedothorax gibbosus: CAOE_0504
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Entry
CAOE_0504 CDS
T08548
Name
(GenBank) RNA polymerase sigma factor 54 interaction domain-containing protein
Organism
ceng
Cardinium endosymbiont of Oedothorax gibbosus
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_2
HTH_23
HTH_29
AAA
HTH_11
MCM
HTH_28
HTH_Tnp_ISL3
HTH_30
HTH_17
AAA_16
MshEN
Motif
Other DBs
NCBI-ProteinID:
CAH2559936
UniProt:
A0A8X6GEL3
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Position
1:605559..606800
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AA seq
413 aa
AA seq
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MKEDLQYIKQRFNIIGNAPLLNRAIEIAMQVASTDLSVLIIGESGTGKESFSKIIHALSP
YRHGSFIAINCGAIPEGTIDSELFGHEKGAFTGALESRKGYFEEANSGTIFLDEIGEMPL
GTQTRLLRVLEYGEYVKVGSSSVQKTKVRVVAATHVDLLYAIKQGKFREDLYYRLNTIPI
NIPPLRERDADIIQLFHKFSSDFATKYRVKPLEISPDTKDILRTYPFPGNIRQLKNIVEQ
MALLEEVGMVTPKVIEKYLPKIQSHTLPVLYKKWKDNGLLEKEYIYPILFDVKRDIAELK
ALMFNFMESGAIKNPILKEHTRLGACSDQENISKKIHFLDTAQSFKEDNLNYIGASYTGE
NLSIEAQEQALIRRSLQKNDGNRKNAADDLGISERTLYRKIKQYEIEESDFKQ
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagatcttcaatatatcaaacaacggtttaatattattggaaacgctccatta
ttaaatagagctattgaaatagcgatgcaggtcgcttctactgatctatccgttttaatc
ataggtgaaagtggtactggcaaggaatctttttcaaagattattcatgcactgagtccc
taccgtcatggtagctttatagctattaattgtggagctattccagaaggtacaatagat
tctgaactttttggccatgaaaaaggagcctttacgggtgccctagaaagccgaaaggga
tattttgaagaagcaaatagtggcaccatttttctagatgagataggtgaaatgcctttg
gggacacaaactagacttttacgtgtattagaatatggagaatatgtaaaagtaggttcc
tctagcgtacaaaaaaccaaagtgcgtgtagtagctgctacgcatgtagatttactctat
gccattaaacaaggcaaattccgagaagatttgtattacaggctcaatacaattccgatt
aacataccccctctgcgtgaacgtgatgcagatattatacagttatttcataaattttcc
agtgattttgctactaaataccgcgttaagcctttagaaatcagcccagatacaaaagat
attttgcgcacctatccatttccgggtaacatccgacagttgaaaaatattgttgagcaa
atggcactgcttgaagaggtgggtatggttacaccaaaggtaatagagaagtatttaccg
aaaatacaaagccatacgttaccagttctgtataagaaatggaaggataatggactgctt
gaaaaagaatatatctatcccatcctctttgatgtaaaaagagatattgcagaattaaaa
gcattaatgtttaattttatggaatccggcgctattaaaaatcctattctaaaagaacat
actcgccttggagcctgcagtgaccaagaaaacatatccaaaaagatccactttttagat
acagcgcaatcttttaaagaggataatctaaattacataggggcatcctatacaggagaa
aatctttctattgaagcccaagaacaagcgttaattcgtagatctctgcaaaaaaacgat
ggaaatcgtaaaaatgcagctgatgatttagggatttctgaaagaacgctctatcgaaaa
attaaacaatatgagattgaagaatctgattttaagcaatag
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