Coxiella endosymbiont of Amblyomma nuttalli: CEAn_00075
Help
Entry
CEAn_00075 CDS
T07596
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ceno
Coxiella endosymbiont of Amblyomma nuttalli
Brite
KEGG Orthology (KO) [BR:
ceno00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CEAn_00075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ceno03021
]
CEAn_00075
Transcription machinery [BR:
ceno03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CEAn_00075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QTS83624
LinkDB
All DBs
Position
97149..99263
Genome browser
AA seq
704 aa
AA seq
DB search
MSTHKKKSKIKVIKEKQKTITERDQIQKPNAKRSVKIKLTAVRRTLTNVKPTLTINTKQT
TKAKKAMVVIEPERSSFVPSIEKKPALASSLQVQLLITAEENITETQRLGFGALLEEAKH
KGYLIHEDLINLLPNDYADPSQIEGIIGRLTEMGIKVFEVPPDADSLLLGEDTQSDDEIN
EDVAEVLATETRTTDPIRMYMREMGSVELLTREGEIIIAKRIEKGIRQVMSAIVEYPELI
ESFIREYDTLLMREGRLNDLLIGFFDEESEEALQLEERTKESDLSEGDEDEDTDDFDESA
PDPLVTQKHMHELKRLYGRYLNSIKRYSKKNLETLKHQKNLAECFSIFKLSIKQFNRLTG
RLRSLLQEARTQERLIMNYCVTKAKTLRKKFITSFPHNETNIEWLEQYKKENKEQAKRLE
KYSKEIYRAQRNLTQLEEKSNLSIQEIKEINRRVAIGEAKSRRAKKEMIEANLRLVISIA
KKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIR
IPVHMIETINKLNRINRQILQETGQEATPEELGRRMEMSEEKVRKVLKIAKEPISMETPI
GEDEDSNLGDFIEDINTESPIDYATSSGLQEATREILATLTPREAKVLRMRFGIDMNTDH
TLEEVGKQFDVTRERIRQIEAKSLRKLRHPSRAEKLRSFIESEE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacccacaaaaagaaatctaaaatcaaagttattaaagagaagcaaaaaactatt
actgaaagagaccaaattcaaaaacccaacgctaaacggtcggtaaagattaaactaaca
gcagttagacgtacattgacaaatgtcaaacctacactaacgatcaatacgaagcagact
actaaagctaaaaaagctatggtagttatagaaccagaaagatcttcgttcgtgccctct
attgagaaaaaaccagctcttgcttcttcgcttcaagtccaattactcataacagctgaa
gaaaacatcacagaaactcagcgattaggttttggtgctttattagaagaagcgaagcat
aaaggttatctgatccatgaagatttaattaatcttcttcctaatgattatgctgatcct
tcacaaatagaaggtattatcggccgtcttacagaaatgggcattaaagtttttgaagtt
cctcctgatgctgactcattgcttttgggcgaggatactcaatcagatgatgaaattaat
gaagatgtcgctgaagtattagcaacagaaacccgtactaccgatcctattcgtatgtat
atgcgcgaaatgggtagcgtcgaattattaacacgagaaggtgagattattatcgccaaa
cgcatcgaaaaaggcattcgacaagtgatgagtgcgatagttgaatatcctgaactcatc
gaatcgtttattagagaatacgacactcttctaatgagagaagggcgtttaaatgattta
cttatcggtttttttgacgaagaatccgaagaagcattacagcttgaagagcgcactaaa
gaatcggacttatccgaaggggatgaagatgaggatacggatgattttgatgagagtgcc
ccggatcctcttgttactcaaaagcatatgcacgagcttaaaaggctctatggtcgttat
ttaaattcaattaaacgttacagcaaaaagaatttagaaactctaaaacatcaaaagaat
cttgcagaatgcttttctatctttaagctttctattaagcagtttaatcgactcacgggt
cgattacgttctttactacaggaagcacgcacacaagaacgattgattatgaattattgt
gtgacaaaagcaaaaactcttcgtaaaaagtttattacttcgtttccacacaatgagaca
aatatagaatggttggaacagtacaaaaaagaaaataaggaacaagcaaaacgattagaa
aaatacagcaaagaaatttatcgtgcccaacgaaatctgacgcagttagaggaaaaaagt
aatttaagtattcaggaaataaaggaaatcaatcgtcgtgtagcaattggtgaagcaaaa
tcgcgtcgtgcaaaaaaagagatgattgaagccaacttacgactagtaatttcaatcgca
aaaaaatacaccaatcgcggcttgcaatttctcgatcttattcaagaaggtaatattggc
ttaatgaaagcggtcgataaatttgaatatcgtcgcggttataaattttcgacatatgca
acgtggtggattcggcaagctattacgcgctcaattgctgaccaggcacgcactatccgt
attcccgtgcatatgattgaaactatcaataaacttaatcgcattaatcgacaaatttta
caagaaaccggtcaagaggcaactccagaagaattaggtcgacgtatggagatgtctgaa
gagaaagtaagaaaagtgttaaaaattgcgaaagaacctatttcaatggaaacaccaatt
ggtgaagatgaagattctaacttaggagactttatcgaagatataaacacagaatctcca
atagattatgcaacttcttccggtcttcaggaagccactcgagaaattttagccacactt
actcctcgggaagctaaagtactacgtatgcgcttcggcatcgatatgaatactgatcat
acactcgaagaagtaggtaaacaatttgatgtcacacgggaacggattcgtcaaatcgaa
gcaaaatccctacgtaaattgcgtcatcctagtcgagctgagaagctacgtagctttatt
gaatctgaagaataa
DBGET
integrated database retrieval system
