Coxiella endosymbiont of Amblyomma nuttalli: CEAn_00258
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Entry
CEAn_00258 CDS
T07596
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ceno
Coxiella endosymbiont of Amblyomma nuttalli
Pathway
ceno03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ceno00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CEAn_00258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ceno03021
]
CEAn_00258
03400 DNA repair and recombination proteins [BR:
ceno03400
]
CEAn_00258
Enzymes [BR:
ceno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CEAn_00258
Transcription machinery [BR:
ceno03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CEAn_00258
DNA repair and recombination proteins [BR:
ceno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CEAn_00258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QTS83785
LinkDB
All DBs
Position
342078..346202
Genome browser
AA seq
1374 aa
AA seq
DB search
MRDLLKQLKHDKRASEFDALCIKLASPEEVRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRDRMGHIELASPVAHIWYLKSL
PSRIGLLLDMTLRDIERILYFETYVVVDPGMTDLEPQQLLSEEAYLDALEEYGDEFIALM
GAEAIQRLLRDISVATEVEALRAELPGTTSETKMKKLTKRLKVLIAFLESNNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLKAPDIIVRNEKRMLQ
EAVDALLDNGRRGRMILGSNRRPLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQAGLPKKMALELFKPFIFGKLQRRGLATTIKAAKKMVESEAPEVWDILEEVIREHP
ILLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLVCTAYNADFDGDQMAVHVPLTLEAQLEA
RSLMMSTNNVLHPANGEPIIVPTHDVVLGLYYITRDRVNAKGENMKFADVDEVVRAYENG
KVALHARIAVRIKESILDEIGQTGKRELLTNTTVGRVLLWQIVPAGLPFVLIDQPMTKKA
VTKLLDICYRNLGLKVTVIFADKLMYMGFHYATYSGVSIGVNDLVLPEQKGAIISEAEEE
VREIEKQYASGLVTYGERRNKVIDIWSRTNDQVAKAMMEKIAIEKVKNTHGKEVIQNSFN
SIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGTIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEYDCGTNASIEMMPHIEGGDVVEPLRERVL
GRVLADSVTSSKSQKELIAKDTLLDEKLVDILEEHSIDRVKVRSAITCDTPYGICSMCYG
RDLARGHIVNVGEAIGVVAAQSIGEPGTQLTMRTFHIGGAASRATTANSIEVKSVGKIKL
RNLKTVEQANGNLVAISRSGELVVQDAQGGEREHYNVPYGATITIHDGVSVKAGQMVAQW
DPHTHPIITEVAGILHFVDLADGITMNRQTDELTGLSSIVVTSTKQRSVSGRELRPMVKL
VDENNHDLFLPGGKKVPAHYFLPEGTILTKEDGEMVGIGDVLARIPQETSKTRDITGGLP
RVADLFEARRPKDAAILAEISGVISFGKDTKHKGRLVITAPDGTIHEELIPKWRHVSVFE
GEIVEKGEVIADGPRDPHDILRLLGVNALSNYIVNEVQEVYRLQGVKINDKHIEVIVRQM
LRKVKITYAGDTEFLQDEQIERTRVREENEKTFKKGGKRAEFKPILLGITKASLATESFI
SAASFQETTRVLTAASVGGKRDDLRGLKENVIVGRLIPAGTGFSYHQQRCKGGE
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
gtgagagacttattaaaacaactaaaacatgacaagcgcgcatctgaatttgatgcgctg
tgcattaaactcgcatctcctgaagaagtgcgctcgtggtcatatggtgaagtgaaaaaa
ccggagacgatcaattatcgtacatttaaacctgaacgggacggtttattttgcgcaaaa
attttcggccccattaaagattatgaatgcttgtgcggtaaatacaaacgtttaaaacat
cgtggtgttatttgcgaaaaatgcggtgtggaggtgacattatctaaagtgcgtcgtgat
cgtatgggtcacatcgaattggcttctcccgtagcacacatatggtatcttaagtcgtta
ccttcacgtattggattattactcgacatgactttacgtgatattgaacgcattctttat
tttgaaacttatgtggtcgtagatcctggcatgactgatttagaaccgcagcaattactt
tccgaagaagcttatctcgatgcattggaagaatatggtgacgaatttatcgcgctgatg
ggcgcagaagcaattcaacggttgttacgtgacattagtgttgcaacagaagtagaagcg
ttgcgtgcagaattaccaggtacaacttcagaaaccaaaatgaagaaactcactaagcga
cttaaagtcttgattgcttttttggaatcaaataataagccagaatggatgatattgacc
gtcttacccgttctgccacctgatcttcgaccgctggtaccactcgatggtggacgtttt
gccacttcagatctgaacgatctatatcgtcgcgtgattaatcggaataatagattaaag
cgcttgttggatctaaaagctccagatattatcgtgcgtaatgaaaagcgaatgctacaa
gaggcggttgatgcattgctagataatggtcgtcggggacgaatgattttaggttctaat
cgccgaccactcaagtcgcttgcagatatgattaaaggtaaatctggtcgtttccgtcaa
aatttattaggtaaacgtgtagattattctggtcgttcagtgatcgtagttggccctacc
ttaaaattacatcaagcaggtttaccaaagaaaatggcactggaattatttaaaccgttt
atttttggtaaattacagcgccgtggtttagcaactacaattaaagctgccaagaagatg
gttgaaagtgaagcgcccgaagtatgggatattttagaagaagtgattcgtgagcatcct
atcttattaaatcgcgcgccaacgttacatcgtttaggaattcaagcatttgaacccgtt
ttagttgaaggaaaagctattcaattacatccacttgtttgtacagcctataacgctgac
ttcgatggtgaccaaatggcagtgcacgtgccactaacactggaggcacaattggaagcg
cgttcgttaatgatgtctaccaacaatgtcttacatcctgctaatggtgaacctattatt
gtacctactcatgatgtggtgctaggactctactacatcactcgtgatcgcgtaaatgcg
aaaggtgaaaatatgaaatttgcagatgtagatgaagtagttcgcgcttatgaaaatgga
aaagtagctttacacgcgcgcattgctgttcgtattaaagaaagtattttagatgaaata
ggtcagacaggaaaacgtgagctattaactaataccactgtgggtcgtgtcttattgtgg
cagattgttcccgcaggactaccatttgtattaattgatcaacccatgacgaaaaaagcg
gtaacaaagttacttgatatctgttaccgcaatctgggtcttaaggtaactgttattttt
gcagacaaattaatgtatatgggtttccattacgccacatactcgggagtatctattgga
gttaacgacctcgtcctgccggaacaaaaaggcgccattatttcagaagcggaggaggag
gttcgtgaaattgaaaagcaatatgcttctggcttagtaacctacggcgaacgtcgcaat
aaagttattgatatttggtcacgtactaacgatcaagtggctaaagcgatgatggaaaaa
attgcgatcgagaaagtcaaaaatactcatggtaaggaggttattcaaaattcttttaat
tccatatacatgatgtccgattccggcgctaggggttcagcagcgcaaatacgtcaattg
gcaggtatgcgaggtttgatggccaaacccgatggtaccattattgaaacaccgattacc
gctaacttccgagaaggattaaatgttttacagtactttatttctactcacggtgcgaga
aaaggtttggcagatacggcgttaaaaactgctaattcaggttatttgacgcgacgtttg
gtcgatgtcgcgcaagatttagtggtgacagagtatgattgcggtactaatgccagcatt
gaaatgatgccccatattgaaggaggcgatgttgtggagccgctgcgcgaacgtgtgctg
gggcgtgtactagcagactctgtaactagttcaaaatcacaaaaagaacttattgctaaa
gatacattactggacgaaaaacttgtcgatatccttgaagagcacagcattgatcgtgtt
aaggtacgatccgccattacttgcgatactccttatggtatttgttcaatgtgttatggt
cgtgacctggctcgcggtcacatagttaatgtgggtgaagcaattggtgtggtagctgcg
caatccatcggtgaacctggcacgcagttaacaatgcgtaccttccatattggtggtgcg
gcatcaagagcgacgacggctaatagtatcgaagttaaatcggttggtaagataaaactg
cgaaacttgaagactgttgaacaagctaacggtaatttagttgcaatttcacgttcaggc
gagcttgtggtgcaagatgctcagggaggtgaacgagaacattataatgtaccttatggt
gcgacgattactatccatgatggtgtttctgtaaaagctggtcagatggtagctcaatgg
gatccgcatactcatccgattatcactgaagtagcaggtattttgcattttgtggatcta
gcagatggcattacgatgaatcgtcaaaccgatgaattgaccggtttgagtagtattgtg
gtaacctcaactaaacaacggagcgtcagtggtagagaactgcgtccaatggtaaaattg
gttgacgaaaataatcacgacctctttttgccaggtggtaaaaaagtacctgctcactac
ttcctgccagaaggcacaattttaacaaaagaagatggtgagatggtcggcatcggtgat
gttttagcacgtattccacaagaaacgtcgaaaacacgagatattacgggtggtttacct
cgggtggccgatctatttgaagctcgccgaccaaaggatgcagctattttagctgaaatt
tctggggtaataagctttggaaaagatactaaacataaaggtcgccttgttattacagct
cctgatggaacaatacatgaagaattaattccaaaatggcgtcacgtaagtgtttttgaa
ggagaaatagtagaaaaaggggaagttattgcagacggtccgagagatccacatgatatt
ttgcgtcttttgggtgtcaatgcgttatcaaattacatagttaatgaagtacaagaggtc
tatcgtttacaaggagtaaaaattaacgacaaacatatcgaggttattgttcgtcaaatg
ttgcgtaaagtgaaaatcacttacgctggtgatactgaatttttacaagatgaacagatt
gaacgaactcgggtacgagaagaaaatgagaagacttttaagaaaggtggaaaaagagct
gagtttaaacccatcttattgggtattaccaaagcctctttggcaactgaatcatttatt
tcagcggcttctttccaggagactactcgtgtgttgactgcagcttcggtaggaggaaaa
cgtgatgatttacgaggcttaaaagaaaatgttatcgtggggcgtttaataccggctgga
acaggttttagctatcatcaacaacgttgtaaaggtggggaatag
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