Comamonas endophytica: M9799_01480
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Entry
M9799_01480 CDS
T09983
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
cenp
Comamonas endophytica
Brite
KEGG Orthology (KO) [BR:
cenp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cenp03032
]
M9799_01480
03036 Chromosome and associated proteins [BR:
cenp03036
]
M9799_01480
03400 DNA repair and recombination proteins [BR:
cenp03400
]
M9799_01480
DNA replication proteins [BR:
cenp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M9799_01480
Chromosome and associated proteins [BR:
cenp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
M9799_01480
DNA repair and recombination proteins [BR:
cenp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
M9799_01480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
DUF2267
Motif
Other DBs
NCBI-ProteinID:
UYG51949
LinkDB
All DBs
Position
complement(340237..340548)
Genome browser
AA seq
103 aa
AA seq
DB search
MRAVHPPFLERPVVNKTELIEHIANNADISKAAAARALESTIEAVKKTLKKGGTVSLVGF
GTFTVGERSTRTGRNPRTGATIEIQAAKVPKFRPGKALKDALN
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgccgtccatccaccatttctcgagaggcctgttgtgaataagaccgaactgatt
gagcacatcgcgaacaatgccgacatctccaaggccgccgccgcgcgcgctctggaatcg
accatcgaagccgtgaagaagaccctcaaaaagggtggtacagtatcgctcgtcggtttt
ggaaccttcaccgtgggtgagcgttccacgcgcaccggccgcaacccccgcaccggcgcc
acgatcgagatccaggccgccaaggtgccgaaattccgtccgggcaaggcattgaaggat
gcgttgaactga
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integrated database retrieval system
