Comamonas endophytica: M9799_01515
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Entry
M9799_01515 CDS
T09983
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cenp
Comamonas endophytica
Brite
KEGG Orthology (KO) [BR:
cenp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cenp03009
]
M9799_01515 (rimO)
Enzymes [BR:
cenp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
M9799_01515 (rimO)
Ribosome biogenesis [BR:
cenp03009
]
Prokaryotic type
ribosomal protein modification factors
M9799_01515 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
Amidase_5
Motif
Other DBs
NCBI-ProteinID:
UYG51955
UniProt:
A0ABY6GCC3
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All DBs
Position
complement(347585..348973)
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AA seq
462 aa
AA seq
DB search
MNKLQQAKTPKIGFASLGCPKALTDSELILTQLSAEGYETAKTFQGADLVIVNTCGFIDD
AVKESLDTIAEALAENGKVIVTGCLGAKSGSDGGNMVRQIHPSVLAVTGPHATQEVMDAV
HTHLPKPHDPFIDLVPGAFGEAGLKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP
IGDVLKEAKALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVRTRMLELVQALGELA
EPHGAWVRLHYVYPYPSVDEIIPLMASGRVLPYLDVPLQHSHPDVLKRMKRPASGEKNLE
RIQRWREMCPDLIIRSTFIAGFPGETEEEFEHLLDFIRAAEIDRAGCFAYSPVEGAMAND
IPGMLPLEVREARRARFMEVAEEVSAKRLRRRIGSTMQVLVDSAPALGRKGGVGRSYADA
PEIDGVVHLLPPEKISKTMKTGEFTRARIVGTQGHDLVGVPI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaattgcagcaagcaaaaactccgaaaatcggcttcgccagcctcgggtgcccg
aaggcgctgaccgattccgaactgatcctcacgcagctgagcgccgagggctatgagacc
gccaagaccttccagggcgccgacctggtgatcgtcaacacctgcggcttcatcgacgac
gccgtcaaggaaagcctggacaccattgccgaggcgctggccgagaacggcaaggtcatc
gtgaccggctgcctgggcgcgaagtccggcagcgatggtggcaacatggtgcgccagatc
caccccagcgtgctggccgtgaccggtccgcacgcgacgcaggaggtcatggatgcggtg
cacacccacctgcccaagccgcacgaccccttcatcgacctggtgccgggcgcgttcggc
gaggccgggctcaagctcacgcccaagcactacgcctatctgaagatcagcgagggctgc
aaccaccgctgcaccttctgcatcatcccctcgatgcgcggcgacctggtgtcgcgcccg
atcggcgacgtgctcaaggaagccaaggcgctgttcgagggcggggtcaaggaactgctg
gtcatcagccaggacacctcggcctatggcgtcgatgtcaagtaccgcaccggcttctgg
gacggcaagcccgtgcgcacgcgcatgctggagctggtgcaggccctgggcgagctggcc
gagccgcatggcgcctgggtgcgcctgcactatgtctatccgtaccccagcgtcgacgag
atcattccgctgatggcttcgggacgcgtgctgccctacctcgacgtgccgctgcagcac
agccacccggacgtgctcaagcgcatgaagcgcccggccagcggcgagaagaacctcgag
cgcatccagcgctggcgcgagatgtgccccgacctgatcatccgctccaccttcattgcc
ggcttcccgggcgagaccgaggaggagttcgaacacttgctggacttcatccgcgctgcc
gagatcgaccgcgccggctgctttgcctatagcccggtcgaaggcgccatggccaacgac
attcccggcatgctgccgctggaagtgcgcgaggcgcgccgcgcgcgcttcatggaagtg
gcggaagaggtctcggccaagcgcctgcgccggcgcatcggctcgaccatgcaggtgctg
gtcgattccgcgcccgcgctgggccgcaagggcggcgtgggccgcagctatgccgacgcg
cccgagatcgacggcgtggtgcatctgctgccgccggagaagatcagcaagaccatgaag
accggcgagttcacgcgcgcgcgcattgtcggcacgcaggggcacgatctggtcggcgtg
ccgatctga
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