Comamonas endophytica: M9799_01880
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Entry
M9799_01880 CDS
T09983
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
cenp
Comamonas endophytica
Brite
KEGG Orthology (KO) [BR:
cenp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cenp02000
]
M9799_01880
Transporters [BR:
cenp02000
]
Other transporters
Pores ion channels [TC:
1
]
M9799_01880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UYG52020
UniProt:
A0ABY6GBD1
LinkDB
All DBs
Position
complement(445472..447625)
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AA seq
717 aa
AA seq
DB search
MSCRPALLSLLAWATLAGPAAHAAGEDPTTLADVFVTATARPEGRLRIAATTQTIDRADI
ERSSARSVTDLLAEHAVGFLSEWTAAQTSMNLRGAATDGQGRDYRGQVLVLLNGRRAGTA
NLSKLSLSDVERIEIVRGPGSVVYGSQNMGGVINIILRTGASGGGNRASVVGGGSGLWRA
DTQISGASERWDWYVGANAGGRDDYDSGRGGGEMRNTSYKRRGASGALGWQLADLHRVEL
QLRTDGIYNAGFRGSGANIFSRDNRYNQSADLRYEGALPGGRVSWLAHAYAFTDVDEFNW
ASPVIRSGTSAVPGTARDYNHRQLDATGLRLQPRLRLSDSNDLLLGFDYEKNRLRSDRER
NAMPGGPAGQVAPYDTNQTEHTHALYLEDAQTFFGDRLTLRAGLRRTWGETRFDQTPNVP
LAVTTARDYGKTTWSTGAVWKVSDSWALRAGASTGFRAPTASELSADFTAVGGGRSFGNP
NLKPESSRQLEVGTTLRQGSLTVDAALFQNTISDRIITVSRGPATNTSDYANNAADIVAR
GLELSARSEIGRLASGPVLSVFGNSYYHFEMKDKGAAASANTDRVQRMYQYEAAVGLRLA
RGMDRNPGDWSAQLTALLRGPMWYDTEENLLIPQGEPSSTFIHRKGAFTVWNLRGEYRVS
RGMKLFAGINNVFDLNRHPIFIALDKRPCIANPIFQNGGCGTSMPGREWLIGLQADF
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttgccgtccggccctgctgtctttgctggcctgggccacgctggcgggtccagcg
gcccatgcggcgggtgaagacccgacgacgctcgctgatgtgttcgtcaccgccacggcg
cgccccgaagggcgcctgcgcatcgccgccaccacccagaccatcgaccgcgccgatatc
gagcgctcctcggcacgctcggtgaccgatctgctggccgagcacgcggtgggctttctc
agtgaatggaccgccgcccagacctcgatgaacctgcgcggcgcggccaccgacggccag
gggcgcgactaccgcggccaggtgctggtgttgctcaacggtcggcgcgccggcacggcc
aacctctccaagctcagcctgtcggatgtggagcgcatcgagatcgtgcgcggcccgggc
tcggtggtctatggcagccagaacatgggcggggtgatcaacatcatcctgcgcaccggc
gccagcggcggcggcaaccgcgcttccgtcgtgggcggcggcagcgggctgtggcgcgcc
gacacgcagatcagcggcgccagcgagcgctgggactggtatgtgggcgccaatgccggc
gggcgcgacgactacgattcgggccgcggcggcggcgagatgaggaacaccagctacaag
cgccgcggcgccagcggcgcgctcggctggcagctggccgacctgcaccgcgtggaactg
cagctgcgcaccgacggcatctacaacgctggcttccgtggctccggcgccaacatcttc
agccgcgacaaccgctacaaccagtcagccgatctgcgctacgagggcgcattgcccggc
gggcgggtgagctggctggcgcatgcctatgcgttcaccgacgtcgacgagttcaactgg
gcctcgcccgtgatccggtcgggcaccagcgccgtgcccggcaccgcgcgcgactacaac
caccgccagctcgatgccaccggcctgcgcctgcagccgcgcctgcgcctgagcgacagc
aacgacctgctgctgggcttcgattacgagaagaaccggctgcgctcggaccgcgagcgc
aatgccatgcccggcgggcccgcgggccaggtcgcgccctatgacaccaaccagaccgag
cacacccacgcgctgtatctggaggatgcacagaccttcttcggcgaccgcctgacgctg
cgcgccgggctgcgccgcacctggggcgagacgcgcttcgaccagacgccgaatgtgccg
ctggccgtgaccactgcgcgcgactacggcaagaccacctggtccacaggcgcggtctgg
aaggtcagcgacagctgggcgctgcgcgccggggcctccaccggtttccgcgcgcccacg
gccagcgagctgtcggccgacttcaccgcggtgggcggcgggcgcagcttcggcaatccg
aacctcaagcccgagtccagccgccagctggaagtcggcactaccctgcgccagggttcg
ttgacggttgacgccgcgctgttccagaacaccatctcggaccgcatcatcaccgtctcg
cgcggcccggcgaccaacacctcggactacgccaacaatgccgccgatatcgtcgcgcgc
gggctggagctcagcgcgcgcagcgagatcggccggttggccagcggtccggtgctcagc
gtcttcggcaatagctactaccatttcgagatgaaggacaagggcgcggccgcctcggcc
aacaccgaccgcgtgcagcgcatgtaccaatacgaggccgcggtcggcctgcgcctggcg
cgcggcatggaccgcaacccgggcgactggagcgcacagctcacggcgctgctgcgcggg
cccatgtggtacgacaccgaggagaacctgctgatcccgcagggcgagccgagcagcacc
ttcattcaccgcaagggcgcgttcaccgtgtggaacctgcgcggcgaataccgcgtgagc
cgcggcatgaagctgttcgcgggcatcaacaacgtcttcgacctgaaccgccatccgatc
ttcatcgcgctcgacaagcggccgtgcatcgccaacccgatcttccagaacggcggctgc
ggcacttcgatgccggggcgcgaatggctgatcgggctgcaggccgatttctga
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