Comamonas endophytica: M9799_02615
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Entry
M9799_02615 CDS
T09983
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cenp
Comamonas endophytica
Pathway
cenp03030
DNA replication
cenp03430
Mismatch repair
cenp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cenp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M9799_02615 (dnaX)
03430 Mismatch repair
M9799_02615 (dnaX)
03440 Homologous recombination
M9799_02615 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cenp03032
]
M9799_02615 (dnaX)
03400 DNA repair and recombination proteins [BR:
cenp03400
]
M9799_02615 (dnaX)
Enzymes [BR:
cenp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M9799_02615 (dnaX)
DNA replication proteins [BR:
cenp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M9799_02615 (dnaX)
DNA repair and recombination proteins [BR:
cenp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M9799_02615 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_18
AAA_14
AAA_assoc_2
AAA_30
AAA_19
Rad17
AAA_16
TsaE
nSTAND3
Adeno_E1B_55K_N
SKI
PIF1
AAA_28
Herpes_Helicase
ORC-CDC6-like
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-ProteinID:
UYG52152
LinkDB
All DBs
Position
complement(605662..607590)
Genome browser
AA seq
642 aa
AA seq
DB search
MSYLVLARKYRPRNFSEMVGQEHVVQALSNALTQQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCQGPDGQGGITATPCGVCAACTEIDSGRFPDYTELDAASNRGVDEVQGLLEQAVYKP
VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPMTVLSRCLQFNL
RPMAPETVLEHLGRVLEAENIPAEPQALRLLARAARGSMRDALSLTDQAIAFGSGQLLEA
GVRQMLGSVDRSHVFRLIAALAQGDGRSVVETSDALRVNGLSAASTLEEMAAVLQRMAVL
QAVPQMAQDASDPEAEMIARLAQAMPADETQLLYSICLHGRTELGLAPDEYAALTMALLR
LLAFKAPAEKKTPAIAETAPAPAPVAAPVAAPAARPEPPAPAPVPVPAARPAPVAAPAPA
AAPVAPPRAEPPVRQPLAEAVVSAEDGEGEPFGIDNVEFAPMEVPPWEPLPQESPRMAQR
RPAAPEPQTEPESPPEPMARAAWTPSEPSGEPVQTTPEGDRWFAAVQQLIASEAITALVR
ELALQSQLVGCEGDHWTLCVQRQSLNQATARERLRAALAEAGLAQQLSVEIGPVTDTPAR
RNAAAAQERQRVAEDIVMNDPLVQTLMREHGARIVPGSIKPA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacctcgtgcttgcccgcaaataccgtccccgcaatttctccgaaatggtgggg
caggagcatgtcgtgcaggcgctttcgaacgccctgacgcagcagcgcctgcaccatgcc
tacctgttcaccggcacccgcggcgtgggcaagacgacggtgtcgcgcatcctggccaag
tcgctcaactgccaggggcccgacggccagggcggcatcaccgccacgccctgcggcgtc
tgcgccgcctgcaccgagatcgacagtgggcgttttcccgactataccgagctggatgcg
gcgtccaaccgcggtgtggacgaggtccagggactgctcgagcaggcggtctacaagccg
gtgcagggtcgcttcaaggtcttcatgatcgacgaagtgcacatgctgacgaacacggcg
ttcaacgccatgctcaagacgctcgaggagccgcccgaatacctgaagttcgtgctggct
acgaccgatccgcagaaggtgccgatgacggtgctctcgcgctgcctgcagttcaacctg
cggccgatggcgcccgaaaccgtgctcgagcatctgggccgggtcctggaggcggagaac
attcccgccgagccgcaggcgctgcgcctgctggcgcgcgccgcgcgcggctcgatgcgc
gatgcgttgtcgctgaccgaccaggccattgccttcggcagcggccagctgctggaagcg
ggcgtgcgccagatgctcggcagcgtcgaccgctcgcatgtgttccgcctgattgccgcg
ctggcgcagggcgatggccgcagcgtcgtcgagacgtccgatgcgctgcgcgtgaatgga
ctgtccgctgcctccacgctcgaggaaatggccgccgtgctgcagcgcatggcggtgctg
caggccgtgccgcagatggcgcaggacgccagcgaccccgaggccgagatgatcgcccgt
ctggcgcaggccatgccggccgatgaaacgcagctgctctacagcatctgcctgcatggc
cgcaccgagctgggcctggcgcccgatgaatacgcggcgctgaccatggcgctgctgcgg
ctgctggccttcaaggcaccggctgaaaaaaaaactccggcaatagctgagactgcccca
gcgccagccccagttgcggcacctgtggcagcgcccgcggcaaggcctgagccgccagct
ccggctcccgtgcccgttcccgctgcgcgccccgcaccggtcgcagcgcctgcgcccgct
gccgcgcccgtggcgccgccgcgcgccgagccgcccgtgcgccagccgctggccgaagcc
gtggtgtctgccgaggatggcgagggcgagccctttggcatcgacaacgtggaattcgcg
ccgatggaggtgccgccctgggagccgctgccgcaggagtcgcctcggatggcgcagcgc
cggcccgccgcgcccgagcctcagactgaacccgaatccccacccgaaccgatggcccgc
gccgcctggactccctccgagccttcgggcgagccggtgcagaccacgcccgagggcgac
cgctggtttgccgccgtgcagcagctgatcgccagcgaggccatcaccgcgctggtgcgc
gagctggcgctgcagtcgcagctcgtgggctgcgagggcgatcactggacgctgtgcgtg
cagcgccagtcgctgaaccaggccacggcgcgcgagcgtttgcgcgcggcgctggctgaa
gccggcctggcgcagcagctgagcgtcgagatcggcccggtcaccgacacgcccgcgcgg
cgcaatgcggccgcggcgcaggagcgccagcgcgtggccgaggacatcgtgatgaatgac
cccctggtgcagacgctgatgcgcgagcatggcgcacgcatcgtgccgggtagtatcaaa
cctgcttaa
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