Comamonas endophytica: M9799_04905
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Entry
M9799_04905 CDS
T09983
Name
(GenBank) TIGR03915 family putative DNA repair protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cenp
Comamonas endophytica
Pathway
cenp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cenp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M9799_04905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cenp03400
]
M9799_04905
Enzymes [BR:
cenp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
M9799_04905
DNA repair and recombination proteins [BR:
cenp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M9799_04905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
Motif
Other DBs
NCBI-ProteinID:
UYG52584
LinkDB
All DBs
Position
complement(1121383..1122351)
Genome browser
AA seq
322 aa
AA seq
DB search
MAAQTLILPGDGTDFAHWRSVARWLWSQQVPPEQVVWHTEDGQREAPDLFAPPPGPSALA
APASSPERPLTVPRAWLEQAEHCLLHCDPDRFALLYRLLWRMQHEPALRHDLLDADHVQM
QHWIKAVRREVHKTHAFVRFRPVALADDPVDGAGPLHVAWFEPVHHIVHAAAPFFVKRFA
NMRWAILTPRVSLRWWPDAPDVAALAAQGVEPDFALKPFKARPGVLSWGPGASAEDAPAL
DAGEGLWLTYYAHIFNPARLKVAAMCKEMPRKYWHNLPETQLISPMIQAAQARSAAMLAN
APTTPQRKLPQRELPRKPAVKD
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcagaccctgatcctgcccggcgacggcaccgacttcgcgcattggcgcagc
gttgcgcgctggctgtggtcgcagcaggtgccgcccgaacaggtcgtctggcataccgag
gatgggcaacgcgaggcgcccgatctttttgcgccgccgcccgggccttccgcgctggct
gcgccggcatcgtcccccgagcgtccattgaccgtgccgcgcgcctggctggaacaagcc
gagcattgcctgctgcactgcgaccccgaccgctttgcgctgctctaccggctgctgtgg
cgcatgcagcatgaacccgcgctgcgccacgacctgctcgatgccgaccacgtgcagatg
caacattggatcaaggccgtgcgccgcgaggtgcacaagacccatgccttcgtgcgcttc
aggcccgtggcgctggccgatgacccggtggatggcgccgggccgctgcatgtcgcctgg
ttcgagccggtgcaccatatcgtgcatgccgcggcgccgtttttcgtcaagcgcttcgcc
aacatgcgctgggccatcctcacgccgcgcgtcagcctgcgctggtggcccgatgcgccc
gacgtcgccgcgctggcggcgcagggcgtggagcccgacttcgcgctcaaacccttcaag
gcccgccccggcgtgctgagctgggggccgggcgccagcgccgaggatgcgcccgcgttg
gacgccggcgagggcctgtggctcacctattacgcgcatatcttcaaccccgcgcggctc
aaggtggcggccatgtgcaaggaaatgccgcgcaagtactggcacaacctgcccgagacc
cagctgatatcgcccatgatccaggcggcgcaggcgcgcagcgcggcgatgctggccaat
gcgcccacgacaccgcaaagaaagctgccccagcgagagctcccgcgcaagcctgccgtg
aaggactag
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