Comamonas endophytica: M9799_05205
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Entry
M9799_05205 CDS
T09983
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
cenp
Comamonas endophytica
Pathway
cenp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cenp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M9799_05205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cenp03019
]
M9799_05205
Messenger RNA biogenesis [BR:
cenp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
M9799_05205
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
Pep_M12B_propep
Motif
Other DBs
NCBI-ProteinID:
UYG52642
UniProt:
A0ABY6GE62
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All DBs
Position
1183818..1184501
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AA seq
227 aa
AA seq
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MLDRDGFRPNVGIILLNHKNQVFWGKRIRTHSWQFPQGGIDRGESPEQAMFRELHEEVGL
KPDHVRVVARTRDWLRYEVPDRYIRRDARGHYRGQKQIWYLLQLLGHDWDLNLRATDHPE
FDAWRWNDYWVPLEVVVEFKRGVYEMALTELARFLPRQEQRNRYLRSGMRNRDPDGSAMP
AASLPSRTTLGLLHPGLELPPGASFDPDPQTDLTAASQRAAGGNKHP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaccgggacggatttcgcccgaacgtcggcatcatcctgctcaaccacaagaac
caggtgttctggggtaaacgcatccgcacccacagctggcagttcccgcaaggcggcata
gaccgcggggaatcgcctgagcaggcgatgtttagggaattgcacgaagaggtgggtctg
aagcccgaccacgtccgcgtggtcgccagaacccgggactggttgcgctacgaggtgccg
gaccggtatatccgacgcgatgcgcgcgggcactaccgcggccaaaagcagatctggtat
ttgctgcagctgctgggccatgactgggacttgaacctcagggccaccgaccatccggaa
ttcgacgcctggcgctggaacgactactgggtgccgctggaagtggtggtggagttcaag
cgcggcgtctatgaaatggcgctgaccgagctggcgcgcttcctgccgcgccaggagcag
cgcaaccgctacctgcgcagcggcatgcgcaaccgggaccccgacggctccgccatgccc
gcagcctcgctgccttcgcgcaccacgctgggcctgctgcatccggggctggagcttccg
cccggcgccagcttcgaccccgatccgcagaccgatctgactgcagccagccagcgcgcg
gcgggcggcaacaagcatccctga
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