KEGG   Comamonas endophytica: M9799_06035
Entry
M9799_06035       CDS       T09983                                 
Symbol
sctD
Name
(GenBank) type III secretion system inner membrane ring subunit SctD
  KO
K03220  type III secretion protein D
Organism
cenp  Comamonas endophytica
Brite
KEGG Orthology (KO) [BR:cenp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cenp02044]
    M9799_06035 (sctD)
Secretion system [BR:cenp02044]
 Type III secretion system
  Type III secretion core apparatus
   M9799_06035 (sctD)
SSDB
Motif
Pfam: Yop-YscD_cpl Y4YQ_C
Other DBs
NCBI-ProteinID: UYG52797
LinkDB
Position
complement(1357762..1359201)
AA seq 479 aa
MTNAHAQDRAAMTPPAAGADLPDLELRVLSGCHQGASLPVEAGEPLRIGSAGDCDVLIGD
CGLEAPVRLHLQPGGWTLADADATAAPVHAFGATALLGQVGVTVCAPHVPWQAFVPPLPT
DPAQPPAGTGQEVQEMPGAQEVQEVHDVQEVQEVQEVRMRSPAAPRPSRRGQLATGAALA
LALLAGSWMLWGRLPPPALAESLNEKPAKAALSPQARDDAVKQASLAIALVDPALRMEVT
PNAEGGVTVSGWVDGVEQFDRLAQGLSGLRPLPRLAVHTASEMLDVLQDAASAHGAHLQF
TPAGSGKVQATGLVATPAQHQAILAQLRERAPQGIEIVDGLRVASMQAPAVRRWLQAQGL
GVTEVEWDGEQLLVQVDVNAAQRPLLERLLAAPQSPLAGVPFVLQTRWLQQDTAPARVGA
GASGLPFSIRSVVGGPAPYVVLADGEKLQPGGTRSGWQLVAVAPDHIVWNGPKRLEVAR
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgacgaacgcccatgcacaagacagggcggcgatgacgccgccggcagccggtgcggac
cttccggacctggagctgcgtgtcctttccggctgccaccagggggcctcgctgcccgtc
gaggcgggcgagccgctgcgcatcggcagtgccggggattgcgacgtactgatcggcgac
tgtggcctggaggcgccggtgcggctgcatctgcagcccggcggctggacgctggcggat
gccgatgcaacggcggcgcccgtccacgcctttggcgccacggcattgctggggcaggtc
ggcgtgacggtttgcgcgccgcatgtgccgtggcaggcattcgtgccgccgctgcccacg
gacccggcgcagccgccggccgggacggggcaggaggtgcaggaaatgcccggcgcgcag
gaagtgcaggaagtgcatgacgtgcaggaggtgcaggaggtgcaggaggtgcggatgcgg
tcccccgccgcgccgcgcccctcgcgccgcggccagcttgcaaccggtgccgcactggcg
ctggccctgctcgcgggcagctggatgctgtgggggcggctgcccccgcccgccctcgcc
gaatcgctgaacgagaaaccggcaaaggcggcgctgtcgccacaagcccgcgacgacgcg
gtgaagcaggccagcctggccatcgcactggtggacccggcgctgcgcatggaggtcacg
cccaatgccgaaggcggtgtcaccgtgagtggctgggtggacggcgtggagcagttcgat
cgcctggcgcaagggctctcgggcctgcggccattgccgcgcctggcggtgcacacggcg
tccgagatgctcgatgtcctgcaggatgccgcgtcggcgcatggagcacatctgcagttc
acgccggccggctccggcaaggtgcaggccacgggcctggtggccacgcccgcgcagcac
caggcgatcctggcgcagctgcgcgaacgcgcgccccagggcatcgagattgtggacggc
ctgcgcgtggcctcgatgcaggcgcccgcagtgcgccgctggctgcaggcgcaggggctg
ggcgtcaccgaggtggaatgggatggcgagcagttgctggtgcaggtcgatgtcaacgcc
gcgcagcgcccgctgctcgaacgcctgctggccgcgccgcagtcgcctctggccggagtg
cccttcgtgctgcagacccgctggctgcagcaggacacggcacccgcgagggtcggtgcc
ggcgccagcggattgcctttcagcatccgcagtgtggtcggtggcccggcgccttatgtg
gtgctggccgatggcgagaagctccagcccggtggcacgcgttccggctggcaactggtg
gccgtggcgccagaccatatcgtatggaatggccccaaacgtctggaagtcgcacgatga

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