Comamonas endophytica: M9799_08065
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Entry
M9799_08065 CDS
T09983
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cenp
Comamonas endophytica
Pathway
cenp03030
DNA replication
cenp03430
Mismatch repair
cenp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cenp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M9799_08065
03430 Mismatch repair
M9799_08065
03440 Homologous recombination
M9799_08065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cenp03032
]
M9799_08065
03400 DNA repair and recombination proteins [BR:
cenp03400
]
M9799_08065
Enzymes [BR:
cenp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M9799_08065
DNA replication proteins [BR:
cenp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M9799_08065
DNA repair and recombination proteins [BR:
cenp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M9799_08065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UYG53156
UniProt:
A0ABY6GDJ3
LinkDB
All DBs
Position
1784947..1785660
Genome browser
AA seq
237 aa
AA seq
DB search
MSSPIAVIDFETTGMTPGQGARATEVAIVLLEDGQVVDRFQSLMRTGVWIPPFITRLTGI
TNAMVAAAPAAEEVMRDAARFVGAAPMVAHNAAFDRRFWEAELAQAGLQAPQPFACTVLL
SRRLYPEAPSHKLGNIVDHLGLPRAGRAHRALADAEMAASLLARMQHDLRLRWGLGQTGH
GVLSTLQRCPKGQMARLLAQQAAQYPLTRDLFGRDGELLPQDAAVDPARPIIGPSLP
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccccatcgccgtcatcgacttcgaaaccaccggcatgacccccggccagggc
gcccgtgccaccgaggtggcgatcgtgctgctcgaggacggccaggtcgtggaccggttc
cagagtctgatgcgcaccggggtgtggattcccccgttcatcacccggctcacgggcatc
accaatgcgatggtggccgcggcgccggcggccgaggaggtgatgcgcgatgccgcgcgc
tttgtcggcgccgcgccgatggtggcgcacaacgccgcattcgaccgcaggttctgggag
gccgaactggcccaagcgggccttcaggcgccgcagccctttgcctgcaccgtgctgctg
tcgcggcggctgtaccccgaggcgcccagccacaagctgggcaatatcgtcgaccacctg
ggcctgccgcgcgccgggcgcgcccaccgtgcgctggcggatgcggagatggccgcgagc
ctgctggcgcgcatgcagcacgacctgcggctgcgctggggcctcggccagaccgggcat
ggcgtgctgtcgacgctgcagcgctgccccaagggccagatggcgcgcctgctggcgcaa
caggcggcgcagtacccgctgacccgtgacctgttcggccgcgatggcgagcttcttccc
caggatgcggcggttgatccggctcggcccataataggcccctccctcccgtga
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