Comamonas endophytica: M9799_08930
Help
Entry
M9799_08930 CDS
T09983
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
cenp
Comamonas endophytica
Pathway
cenp00020
Citrate cycle (TCA cycle)
cenp00640
Propanoate metabolism
cenp00660
C5-Branched dibasic acid metabolism
cenp00720
Other carbon fixation pathways
cenp01100
Metabolic pathways
cenp01110
Biosynthesis of secondary metabolites
cenp01120
Microbial metabolism in diverse environments
cenp01200
Carbon metabolism
Module
cenp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cenp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
cenp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
M9799_08930 (sucD)
00640 Propanoate metabolism
M9799_08930 (sucD)
00660 C5-Branched dibasic acid metabolism
M9799_08930 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
M9799_08930 (sucD)
Enzymes [BR:
cenp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
M9799_08930 (sucD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UYG50238
LinkDB
All DBs
Position
complement(1998742..1999635)
Genome browser
AA seq
297 aa
AA seq
DB search
MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGESIFNIPIYGSV
KEAAQQTGATVSVIYVPPAGAAAAIWEAVEADLDMAICITEGIPVRDMLEVRNRMKAKEA
AGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVAQLTELGIG
QSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAAQWCKANMKKPIV
GFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTITRNPSEMARLLKGLI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatctatatcaacaaagacaccaaagtcatcacccagggcatcaccggcaagacg
ggccagttccacaccgagaagtgccaggaatacgcgaacggcaagaactgcttcgtcgcg
ggcgtgaacccgaagaaggccggcgagtcgatcttcaacatccccatctacggttcggtc
aaggaagccgcccagcagaccggcgccaccgtgtcggtgatctacgtgccgcccgcaggc
gctgccgccgcgatctgggaagccgtcgaagccgacctggacatggcgatctgcatcacc
gaaggcattcccgtccgtgacatgctggaagtgcgcaaccgcatgaaggccaaggaagcc
gccggcggcaagaagaccctgctgctgggccccaactgccccggcctgatcacgcccgac
gagatcaagatcggcatcatgcccggccacatccacaagaagggccgcatcggcgtggtc
tcgcgctccggcacgctgacctatgaagccgtggcccagctgaccgaactgggcatcggc
cagtcgtcggccgtcggcatcggtggcgacccgatcaacggcctgaagcacatcgacgtg
atgaaggcgttcaacgatgacccggacaccgacgccgtgatcatgatcggcgaaatcggc
ggccccgacgaagccgaagccgcacagtggtgcaaggccaacatgaagaagcccatcgtc
ggcttcatcgctggcgtcaccgcgcctccgggcaagcgcatgggccacgccggcgcgctg
atctccggcggcgccgacacggccgatgccaagctcgccatcatggaagagtgcggcttc
acgatcacccgcaacccgtcggaaatggcgcgtctgctcaagggcctgatctga
DBGET
integrated database retrieval system
