KEGG   Comamonas endophytica: M9799_10590
Entry
M9799_10590       CDS       T09983                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
cenp  Comamonas endophytica
Pathway
cenp00300  Lysine biosynthesis
cenp00470  D-Amino acid metabolism
cenp01100  Metabolic pathways
cenp01110  Biosynthesis of secondary metabolites
cenp01120  Microbial metabolism in diverse environments
cenp01230  Biosynthesis of amino acids
Module
cenp_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:cenp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    M9799_10590 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    M9799_10590 (dapF)
Enzymes [BR:cenp01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     M9799_10590 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: UYG50548
UniProt: A0ABY6G699
LinkDB
Position
2356569..2357438
AA seq 289 aa
MQIRFTKMQGAGNDFVVLDETQGQRGLSPAQYRFLADRHFGVGADQILSVRPAPAEGIDF
EYAIHNADGGEVEQCGNGARCFARYVHDRGLTTKKVIRVKTLSGVIAPEIVGEGQVRVDM
GRPELRPEQVPFDAAGLQSRAVGRAQTWQLPLSDGAAQWIMPVSMGNPHAVLLVDEADTA
PVAAVGPQIERHARFPQRVNVGFLQRVSRSEVRLRVYERGTGETLACGTGACAAVVAGIH
QGLLDTQVRVHTRGGLLQIAWAGGEGDSVFMTGPATFVFDGQIELPEAP
NT seq 870 nt   +upstreamnt  +downstreamnt
atgcaaatccgcttcaccaagatgcagggcgcgggcaacgacttcgtcgtgctcgatgaa
acgcagggccagcgcggcctgtcgccggcccaataccgttttctcgccgaccgccacttc
ggcgtcggcgccgaccagatcctcagcgtgcgccccgcgcccgccgaaggcatcgacttc
gaatatgccatccacaatgccgatggcggcgaggtggagcagtgcggcaatggcgcgcgc
tgcttcgcgcgctatgtgcacgaccgcggcctgaccaccaagaaggtgatccgcgtcaag
accctgtccggcgtcattgcgcccgagatcgtcggcgagggccaggtgcgcgtggacatg
ggccgccccgagctgcggccggaacaggttccgttcgatgctgccggcctgcaatcccgt
gccgtgggccgggcgcagacctggcagctgcccctgtccgacggcgcggcccagtggatc
atgccggtgtccatgggcaacccgcatgccgtgctgctggtcgacgaggcggataccgcg
cccgtggcggcggtgggcccgcagatcgagcggcatgcgcgctttccccagcgtgtcaat
gtcggcttcctgcagcgcgtgagccgcagcgaggtgcggctgcgcgtctacgagcgcggc
acgggcgagacgctggcctgcggcacgggcgcctgcgccgcggtggtcgcaggcatccac
cagggcctgctcgacacccaggtgcgggtccacacgcgcggcggactgctgcagattgcc
tgggccggtggcgagggcgacagcgtcttcatgaccggccccgcgacctttgtttttgac
ggccagatcgaacttcccgaagcaccatga

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