Comamonas endophytica: M9799_10590
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Entry
M9799_10590 CDS
T09983
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cenp
Comamonas endophytica
Pathway
cenp00300
Lysine biosynthesis
cenp00470
D-Amino acid metabolism
cenp01100
Metabolic pathways
cenp01110
Biosynthesis of secondary metabolites
cenp01120
Microbial metabolism in diverse environments
cenp01230
Biosynthesis of amino acids
Module
cenp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cenp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M9799_10590 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M9799_10590 (dapF)
Enzymes [BR:
cenp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
M9799_10590 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UYG50548
UniProt:
A0ABY6G699
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Position
2356569..2357438
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AA seq
289 aa
AA seq
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MQIRFTKMQGAGNDFVVLDETQGQRGLSPAQYRFLADRHFGVGADQILSVRPAPAEGIDF
EYAIHNADGGEVEQCGNGARCFARYVHDRGLTTKKVIRVKTLSGVIAPEIVGEGQVRVDM
GRPELRPEQVPFDAAGLQSRAVGRAQTWQLPLSDGAAQWIMPVSMGNPHAVLLVDEADTA
PVAAVGPQIERHARFPQRVNVGFLQRVSRSEVRLRVYERGTGETLACGTGACAAVVAGIH
QGLLDTQVRVHTRGGLLQIAWAGGEGDSVFMTGPATFVFDGQIELPEAP
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatccgcttcaccaagatgcagggcgcgggcaacgacttcgtcgtgctcgatgaa
acgcagggccagcgcggcctgtcgccggcccaataccgttttctcgccgaccgccacttc
ggcgtcggcgccgaccagatcctcagcgtgcgccccgcgcccgccgaaggcatcgacttc
gaatatgccatccacaatgccgatggcggcgaggtggagcagtgcggcaatggcgcgcgc
tgcttcgcgcgctatgtgcacgaccgcggcctgaccaccaagaaggtgatccgcgtcaag
accctgtccggcgtcattgcgcccgagatcgtcggcgagggccaggtgcgcgtggacatg
ggccgccccgagctgcggccggaacaggttccgttcgatgctgccggcctgcaatcccgt
gccgtgggccgggcgcagacctggcagctgcccctgtccgacggcgcggcccagtggatc
atgccggtgtccatgggcaacccgcatgccgtgctgctggtcgacgaggcggataccgcg
cccgtggcggcggtgggcccgcagatcgagcggcatgcgcgctttccccagcgtgtcaat
gtcggcttcctgcagcgcgtgagccgcagcgaggtgcggctgcgcgtctacgagcgcggc
acgggcgagacgctggcctgcggcacgggcgcctgcgccgcggtggtcgcaggcatccac
cagggcctgctcgacacccaggtgcgggtccacacgcgcggcggactgctgcagattgcc
tgggccggtggcgagggcgacagcgtcttcatgaccggccccgcgacctttgtttttgac
ggccagatcgaacttcccgaagcaccatga
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