Comamonas endophytica: M9799_10670
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Entry
M9799_10670 CDS
T09983
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cenp
Comamonas endophytica
Pathway
cenp00470
D-Amino acid metabolism
cenp00550
Peptidoglycan biosynthesis
cenp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cenp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M9799_10670 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M9799_10670 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cenp01011
]
M9799_10670 (murD)
Enzymes [BR:
cenp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
M9799_10670 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cenp01011
]
Precursor biosynthesis
Amino acid ligase
M9799_10670 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
2-Hacid_dh_C
Pyr_redox_2
Pyr_redox
Sacchrp_dh_NADP
XdhC_C
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
UYG53310
UniProt:
A0ABY6GF59
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All DBs
Position
2373157..2374845
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AA seq
562 aa
AA seq
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MPALGTLHAAEDAAAFVAQIFAQAAPAGDAEIETVEVQAQEEAAPELPPVPAGWPQAEAL
PMADQQLLVLGLGASGLAMARWCARLGAQVTVADTRDNPPQRAVLQQELPQVRFVAGAFD
AALLDGQNFTTLYRSPGLSPQQLAPVLEAAKAQGLRLSGELDLFALALQALAQGHGYQPR
VLAITGTNGKTTVTSLTGQLLAHAGKSVAVAGNIGPTLLDTLSGHIDAGTLPEAWVLELS
SFQLDAATGFSPTAATVLNISQDHLDWHGNLDAYAAAKARIFGNGLMVLNREDPAVMQML
PAPTRVKLQRPQERVHVTFGGDMPRRPGDFGIEVVAGMAWLVRALEADGPAKRARAPQDD
LHIQRLMPADALRIRGRHNAINALAALALATAAGCALAPMLYGLREYRGEPHRVEPVGVV
NEIEFFDDSKGTNVGATVAALTGLGADRRLVAIMGGVGKDQDFSPLAAPVARYARAVVLI
GRDAPLIRAALEASGVPLLAADSMQQAVTLAQAQARPGEAVLMSPACASFDMFQDYEDRA
RQFVRAVQELAQDAGQDLEGWV
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcattgggcacgctgcatgccgccgaggatgcagccgcctttgtcgcgcagatc
tttgcgcaggccgcgccggccggagatgccgaaatcgagacggtggaggtgcaggcacag
gaagaagccgcgcccgagctgcccccggtacccgcgggctggccacaggccgaggcattg
ccgatggcggaccagcaactgctggtgctgggcctgggcgcctcgggcctggccatggcg
cgctggtgcgcgcgcctgggcgcccaggtgacggtggccgatacgcgtgacaatccgccg
cagcgggccgtgctgcagcaggagctgccgcaggtgcgcttcgtcgccggcgccttcgat
gccgcgctgctcgacggccagaatttcaccaccctctaccgctccccgggcctgagcccg
caacagctcgctcctgtgctcgaggccgcaaaggcccagggcctgcgcctgagcggcgag
ctcgatctgttcgcgctggcgctgcaggcgctggcgcagggccatggctaccagcccagg
gtgctggcgatcaccggcaccaatggcaagaccaccgtgacctcgctgaccggccagctg
ctggcgcatgccggcaagagcgtggccgtggccggcaatatcggcccgacgctgctcgac
acgctgtccggccatatcgatgccggcacgctgcccgaggcctgggtgctcgagctgtcg
agcttccagctcgatgcagcgacgggtttttcgcccaccgccgcgacggtgctcaatatc
agccaggaccatctggactggcatggcaatctggatgcctatgccgccgccaaggcgcgc
atcttcggcaacgggctgatggtgctcaaccgcgaagaccccgccgtcatgcagatgctg
ccggcgcccacgcgcgtgaagctgcagcgcccgcaggagcgcgtgcacgtcacctttggc
ggcgacatgccgcggcgccccggcgacttcggcatcgaggtcgtggccggcatggcctgg
ctggtgcgcgcgctggaagccgatgggccggccaagcgcgcgcgcgcgccgcaggacgat
ttgcatatccagcggctgatgccagcggatgcgctgcgcatccgcggccgccacaacgcc
atcaacgcgctggcggcgctggcgctggccaccgccgcgggctgcgcgctcgcgcccatg
ctctatgggctgcgcgagtaccgcggcgagccgcatcgcgtggaaccggtgggcgtggtg
aacgagatcgaattcttcgacgacagcaagggcaccaacgtgggtgccaccgtggccgcg
ctcacgggcctgggcgccgaccggcgcctggtggcgatcatgggaggcgtcggcaaggac
caggatttctcgccgctggccgcgcccgtggcgcgctatgcgcgcgccgtggtgctgatc
gggcgcgatgcgccgctgatccgcgcggcgctcgaggccagcggcgtgccgctgctggcg
gccgattcgatgcagcaggccgtgaccctggcccaggcgcaggcgcggccgggagaggcg
gtgctgatgtcgccggcctgcgccagcttcgacatgttccaggattacgaggaccgcgcg
cgccagttcgtgcgcgccgtgcaggagctcgcgcaggacgcgggccaggatctggagggc
tgggtatga
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