Comamonas endophytica: M9799_16070
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Entry
M9799_16070 CDS
T09983
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cenp
Comamonas endophytica
Pathway
cenp03030
DNA replication
cenp03430
Mismatch repair
cenp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cenp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M9799_16070 (dnaQ)
03430 Mismatch repair
M9799_16070 (dnaQ)
03440 Homologous recombination
M9799_16070 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cenp03032
]
M9799_16070 (dnaQ)
03400 DNA repair and recombination proteins [BR:
cenp03400
]
M9799_16070 (dnaQ)
Enzymes [BR:
cenp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M9799_16070 (dnaQ)
DNA replication proteins [BR:
cenp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M9799_16070 (dnaQ)
DNA repair and recombination proteins [BR:
cenp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M9799_16070 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UYG51549
UniProt:
A0ABY6G952
LinkDB
All DBs
Position
3532457..3533191
Genome browser
AA seq
244 aa
AA seq
DB search
MSRQIVLDTETTGLSADNGDRIIELGCVELLNRKLTGNNLHMYFNAGRDSHEDALRVHGI
TTEFLKDKPRFEQQVDQILDYLQGAEIIIHNAPFDIGFLNKELERAGKPLLRSWVTGVID
TLVMAKERYPGKRNSLDSLCDRLGVDNSGRTLHGALLDAELLADVYINLTRGQDALLISD
EPQEDASGLPIVALDLRSISLPVIQASEQECAEHEAVLAQIDKASDGKTIWRNLPDSLKT
CAII
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccagatcgtccttgataccgagaccacgggcctgtcggccgacaacggcgac
cggatcatcgagctcggttgcgtggagctgctcaaccgcaagctcactggcaacaacctg
cacatgtatttcaacgccgggcgcgacagccatgaagacgcgttgcgggtgcacggcatc
accaccgagttcctcaaggacaagccgcgcttcgagcagcaggtggaccagatcctggac
tacctgcagggcgcggagatcatcatccacaacgcgcccttcgacatcggcttcctgaac
aaggagctcgaacgcgcaggcaagccgttgctcaggtcctgggtgacgggcgtgatcgat
accctggtcatggccaaggagcgctatcccggcaagcgcaattcgctcgattctctttgc
gaccggctgggcgtggacaactccgggcgcacgctgcacggcgcgctgctggatgcggaa
ctgctggccgatgtctacatcaacctgacgcgcggccaggatgcgctgctgatcagcgac
gagccgcaggaagacgcctcgggcctgcccatcgtcgcgctggacctgcgcagcatcagc
ctgccggtgatccaggccagcgagcaggaatgcgcagagcatgaagcggtgctggcgcag
atcgacaaagccagcgatggcaaaactatttggcgcaacctgccggacagcttgaaaacc
tgtgccataatctag
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