Comamonas endophytica: M9799_16220
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Entry
M9799_16220 CDS
T09983
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
cenp
Comamonas endophytica
Pathway
cenp00010
Glycolysis / Gluconeogenesis
cenp00020
Citrate cycle (TCA cycle)
cenp00260
Glycine, serine and threonine metabolism
cenp00280
Valine, leucine and isoleucine degradation
cenp00310
Lysine degradation
cenp00380
Tryptophan metabolism
cenp00620
Pyruvate metabolism
cenp00630
Glyoxylate and dicarboxylate metabolism
cenp00640
Propanoate metabolism
cenp00670
One carbon pool by folate
cenp00785
Lipoic acid metabolism
cenp01100
Metabolic pathways
cenp01110
Biosynthesis of secondary metabolites
cenp01120
Microbial metabolism in diverse environments
cenp01200
Carbon metabolism
cenp01210
2-Oxocarboxylic acid metabolism
cenp01240
Biosynthesis of cofactors
Module
cenp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cenp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cenp_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
cenp_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
cenp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
M9799_16220 (lpdA)
00020 Citrate cycle (TCA cycle)
M9799_16220 (lpdA)
00620 Pyruvate metabolism
M9799_16220 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
M9799_16220 (lpdA)
00640 Propanoate metabolism
M9799_16220 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
M9799_16220 (lpdA)
00280 Valine, leucine and isoleucine degradation
M9799_16220 (lpdA)
00310 Lysine degradation
M9799_16220 (lpdA)
00380 Tryptophan metabolism
M9799_16220 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
M9799_16220 (lpdA)
00670 One carbon pool by folate
M9799_16220 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cenp04147
]
M9799_16220 (lpdA)
Enzymes [BR:
cenp01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
M9799_16220 (lpdA)
Exosome [BR:
cenp04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
M9799_16220 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
GIDA
Thi4
FAD_binding_2
AlaDh_PNT_C
Biotin_lipoyl_2
DAO
NAD_binding_8
FAD_binding_3
HI0933_like
HlyD_3
GCV_H
Lycopene_cycl
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
UYG51575
LinkDB
All DBs
Position
3561105..3562988
Genome browser
AA seq
627 aa
AA seq
DB search
MAIIDIKVPDIGDFDSVGVIELLVQPGDQVAVDQSLITVESDKASMEIPSSHAGVVKELR
VKIGDQVAQGSVVLTLEAQEAGEASAPAAPAPQAAAAPAPAAPAPAPAVELPKAAEGAAP
AVAAPVPQQYAGAAADVECDVVVLGGGPGGYSAAFRAADLGLKVVLVERYATLGGVCLNV
GCIPSKALLHVAAVMDEVKHLSAVGVDFGAPQVNIDQLRGHKEKVIGKLTGGLAQMAKMR
KVTVLRGYGQFAGTHHLSVELTQGEGTERSGGKQVVQFKNAIIAAGSQAVHLPFMPKDPR
VVDSTGALELKEVPKRMLILGGGIIGLEMGTVYSTLGARLDVVEMMDGLMQGADRDLVKI
WQKMNAPRFDNIMLKTKTVGAEATPEGIKVTFAAAEEGGTAPEPQTYDLVLQAVGRTPNG
KKIAAEAAGVAVTDRGFIPVDIQMRTSAPHIFAIGDIVGQPMLAHKAVHEAHVAAEVIAG
EQQGNKELAAAAFNARVIPSVAYTDPEVAWVGLTEDQAKAQGIKVRKGLFPWAASGRAIA
NGRDEGVTKLLFDDSPEAHGHGRILGGGMVGTHAGDMIGEIALAIEMGADAVDIGKTIHP
HPTLGESIGMAAEVAHGSCTDVPPARK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggccatcattgatatcaaggttcccgacatcggcgatttcgacagcgtcggcgtcatc
gagctgctggtgcagcctggcgaccaggtcgccgtggaccagagcctgatcaccgtcgag
tccgacaaggcctcgatggagatcccatcctcgcatgccggcgtcgtcaaggaactgcgc
gtgaagatcggcgaccaggttgcccaaggcagcgtggtgctgacgctcgaggcgcaggag
gccggcgaggcttcggcgcccgcggcgcccgcgccgcaggcagcagcggcgcctgcacct
gctgcaccggcacccgcgcccgcagtggaactgcccaaggccgccgagggtgccgcgccc
gccgtggccgctcccgtgccgcagcaatacgctggcgccgctgccgatgtcgaatgcgac
gtcgtggtgctgggcggcggcccgggcggctattcggccgcgttccgcgccgccgatctg
ggcctgaaggtcgtgctggtcgagcgctacgcgacgctcggcggcgtctgcctgaacgtg
ggctgcatcccctccaaggccctgctgcatgtggcggccgtcatggacgaggtcaagcac
ctgtcggcggtgggcgtggacttcggcgcgccccaggtcaacatcgaccagctgcgcggc
cacaaggaaaaggtcatcggcaagctgaccggcggcctggcgcagatggcgaagatgcgc
aaggtcacggtgctgcgcggctatggccagttcgccggcacccaccatctgtcggtggag
ttgacgcagggcgagggcaccgagcgcagcggcggcaagcaggtcgtgcagttcaagaac
gcgatcattgccgcgggctcgcaggccgtgcacctgccattcatgcccaaggacccgcgc
gtggtggattccacgggtgcgctcgagctcaaggaagttccgaagcgcatgctgatcctg
ggcggcggcatcatcgggctggagatgggtaccgtgtactcgacgctgggcgcgcgcctg
gacgtggtcgagatgatggacggcctgatgcagggcgccgaccgcgacctggtcaagatc
tggcagaagatgaacgccccgcgtttcgacaacatcatgctcaagaccaagaccgtgggc
gccgaggccacgcccgagggcatcaaggtcacgttcgcggcggcggaagagggcggcact
gcccccgagccgcagacctacgacctggtgctgcaggccgtgggccgcacgcccaacggc
aagaagatcgccgccgaggccgcaggcgtcgcggtgaccgaccgcggcttcattccggtc
gatatccagatgcgcaccagcgcgccgcatatcttcgccatcggtgacatcgtcggccag
ccgatgctggcgcacaaggcggtgcacgaggcccatgtcgcggccgaagtcatcgccggc
gaacagcagggcaacaaggagctggcggccgccgcgttcaatgcgcgtgtcatcccgagc
gtcgcctacaccgaccccgaggtcgcatgggtggggttgaccgaggatcaggccaaggcg
cagggcatcaaggtcaggaagggcctgttcccctgggccgcttcgggtcgcgccatcgcc
aacggccgcgacgagggcgtgaccaagctgctgttcgatgattcgcccgaggcccatggc
cacggccgcatcctgggcggtggcatggtcggcacgcacgccggcgacatgatcggcgag
atcgcgctggccatcgagatgggcgccgacgccgtcgacatcggcaagaccatccacccg
catcccacgctgggcgagagcatcggcatggcggcggaagtggcgcacggcagctgcacg
gacgttcctccggctcggaagtaa
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