Comamonas endophytica: M9799_17445
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Entry
M9799_17445 CDS
T09983
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
cenp
Comamonas endophytica
Brite
KEGG Orthology (KO) [BR:
cenp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cenp03000
]
M9799_17445
Transcription factors [BR:
cenp03000
]
Prokaryotic type
Helix-turn-helix
LacI family
M9799_17445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_3
DUF7317
TetR_N
DUF302
HTH_Tnp_ISL3
HTH_24
Motif
Other DBs
NCBI-ProteinID:
UYG53720
UniProt:
A0ABY6GF53
LinkDB
All DBs
Position
unnamed1:104999..106027
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AA seq
342 aa
AA seq
DB search
MTQAPRRTRRSSGRTTLADVARHAGVSPITVSRALRGERGVDPQLVQRVQEAADTLGYVP
DPAARALASQKSSQVLVLVPLLSNALFVDLLEAVHRTLFPEGFQPLIGVTHYDSAEEELL
LRTYLPHRPAGLLVTGFDRSDTALQLIAQSGVPCVHLMETSDSPGVACVGFSQTDAGAAI
TQHLLDRGRRRIAFCGAQLDPRVLQRAEGYRRCLRAAGLYDPGLELLSPERSSIALGARL
FEQMLQRMPDIDAIFFCNDDIAQGGLLAAHRLGVAVPSRIAVAGFNDLAGSDQMVPPLTT
VRTPRSEVGREGASMLLGMMRGTPAPAQCVQLGYELIVREST
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttgacccaagcaccgcgccgcacgcgccgctccagcggccgcaccacccttgccgacgtt
gcccgccacgccggcgtgagcccgatcaccgtctcccgcgcactgcgcggcgagcgcggc
gtcgacccccagctggtgcagcgcgtgcaggaagccgcggacaccctgggctatgtgccc
gacccggcggcacgcgcgctggcctcgcagaaaagctcgcaggtgctggtgctggtgccg
ctgctgtccaacgcattgttcgtcgacctgctggaagccgtgcaccgcacgctgtttccc
gagggcttccagccgctgatcggcgtcacccactacgacagcgccgaagaggagctgctg
ctgcgcacctacctcccgcaccggcctgcaggcctgctggtcacgggcttcgaccgcagc
gacaccgcgctgcagctcattgcccagagcggcgtgccctgcgtgcacctgatggagacc
agcgactcgccaggcgtggcctgcgtgggattttcccagaccgatgccggcgcggccatc
acccagcacctgctggaccggggccgcaggcgcatcgcgttctgcggcgcgcagctcgac
ccgcgcgtgctgcagcgcgccgagggctaccgccgttgcctgcgcgcggccgggctgtac
gaccccgggctcgaactgctcagcccggagcgctcgtcgattgcattgggggcgcgcctt
ttcgagcagatgctgcagcgcatgcccgatatcgacgcgattttcttttgcaacgacgac
atcgcccagggcgggctgctggctgcgcaccgcctgggcgttgcggtgccttcgcgcatc
gcggtggccggcttcaacgacctggccggcagcgaccagatggtgccgccgctcaccacc
gtacgcaccccgcgcagcgaggtcgggcgcgaaggtgccagcatgctgctggggatgatg
cgcggcacgcccgcgcccgcgcagtgcgtgcagctcggttatgagctgatcgtgcgcgaa
agcacctga
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