KEGG   Comamonas endophytica: M9799_18465
Entry
M9799_18465       CDS       T09983                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cenp  Comamonas endophytica
Brite
KEGG Orthology (KO) [BR:cenp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cenp03400]
    M9799_18465
Enzymes [BR:cenp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     M9799_18465
    5.6.2.6  RNA 3'-5' helicase
     M9799_18465
DNA repair and recombination proteins [BR:cenp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    M9799_18465
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: UYG53915
UniProt: A0ABY6GFQ1
LinkDB
Position
unnamed1:complement(319781..322423)
AA seq 880 aa
MAARKKPNTDPALEAWIDERGWKAFPFQRQVWAEMARGASGMLHSSTGSGKTLAVWLGAL
GALRQEIAPEGAKGKPPPLAVLWITPMRALAADTLRSIEAPMQALCPGWSAGLRSGDTSS
SQRAAQDRRLPTVLVTTPESLTLLLSRADARELLKNVRVAVVDEWHELMGNKRGVQTQLA
LARLRTFQPALMTWGLSATLGNLDEALRTLLGSAPETDGRPAVLVQGETDKTLVIDTLLP
AAAERFAWAGHMGLRMLPQVVQAIEESASCLVFTNMRSQAERWYSALLEARPDWAGVLAL
HHGSLDRGVREWVEVGLKEGRVKAAVCTSSLDLGVDFLPVDRVLQIGSAKGVARLVQRAG
RAGHAPGRPSRITLVPTHSLELLEASAARAAVHAGQIEARTSPRAPLDVMVQHLVTVALG
GGFKPEELLAEVRGTVAYAELDEEQWQWCLDFVRQGGPSLAAYPDYHRVVPDEEGVWRVP
DARLARRHRVNIGTIVSDASISVQYLGGAKLGTVEESFIARLKPGDAFMFGGRLLELVRV
EQMTALVRRAASGRAALPRWNGGRMPLSNTLADAVLRELQAADEGRFNSPEMQCVQPLLE
IQQRWSGLPTPQTLVAETFKSREGWHLFVYPFAGRQVHLGLASLIAWRAAQPQTGTFSIA
LNDYGFELLSATPIDWAERLPSLLVLPPLDELLVEVLGSLNATELARRRFREIARIAGLI
FQSHPGERRSNRQLQASAALFYEVFQRYDPRNGLLAQAEQELLTQELDVRQLAAALGRIQ
GQRLSLHALQKPSPLAFPLMVERFREKLSNEPLAQRIARMVAELERSAGGEAVGTAHAPA
QQVFAERESPEWAIDAALALETRSETPTRRKRERTRRTTK
NT seq 2643 nt   +upstreamnt  +downstreamnt
atggcggcgcgcaagaagccgaacaccgaccctgcccttgaagcctggatcgatgaacgc
ggctggaaggccttccccttccagcgccaggtctgggcggagatggcgcgcggcgccagc
ggcatgctgcattcgagcaccggcagcggcaagacactggccgtatggctcggtgcactg
ggcgcgctgcgccaggagatcgcgcccgagggcgccaagggcaagccgccgccgctggca
gtgctgtggatcacgccgatgcgcgcgctggctgccgacacgctgcgctccatcgaggcg
ccgatgcaggcgctgtgcccgggctggagcgcgggcctgcgcagcggcgacacgagctcc
agccagcgcgccgcgcaggaccggcggctgccgacggtgctggtgaccactcccgagagc
cttacgctgctgctgtcgcgcgccgatgcgcgcgagctgctcaagaacgtgcgtgtcgcg
gtggtcgacgaatggcacgagctgatgggcaacaagcgcggcgtgcagacgcagctggcg
ctggcgcggctgcgcacgttccagccggcgttgatgacctgggggctgtcggccacgctg
ggcaatctcgacgaggcgctgcgcacgcttttgggctctgcgcccgaaaccgacggccgg
cccgcggtgctggtgcagggcgagaccgacaagacgctggtcatcgacacgctgctgccg
gccgctgccgagcgcttcgcctgggccggccacatggggctgcgcatgctgccgcaggtg
gtgcaggccatcgaggagagcgccagctgcctggtcttcaccaacatgcgctctcaggcc
gagcgctggtacagcgcgctgctcgaggcgcggcccgactgggccggcgtgctggcgctg
caccatggctcgctggaccgcggcgtgcgcgaatgggtcgaggtcgggctcaaggaaggg
cgcgtgaaggcggcggtatgtacctccagcctggacctgggcgtggacttcctgcccgtg
gaccgggtgctgcagatcggctctgccaagggcgtggcgcggctggtgcagcgcgcgggc
cgcgccggccacgccccgggccggccgtcgcgcatcaccctggtgccgacgcacagcctg
gagctgctggaagcgtcggcggcgcgcgccgcggtgcatgccgggcagatcgaggcgcgc
accagcccgcgcgcgccgctcgatgtcatggtccagcacctggtgacggtggcgctgggc
gggggcttcaagcccgaggaactgctcgccgaggtgcgcggcaccgtggcctatgccgag
ctcgatgaggaacagtggcagtggtgcctggacttcgtgcgccagggcgggccgtcgctg
gccgcctatcccgactaccaccgcgtcgtgcccgacgaggagggcgtgtggcgcgtgccc
gatgcgcgcctggcgcggcgccaccgcgtcaatatcggcaccatcgtcagcgacgcctcg
atcagcgtgcagtacctgggcggcgccaagctcggcacggtggaggaaagcttcatcgcg
cggctcaagcccggcgacgccttcatgttcggcggccggctgctcgaactcgtgcgcgtc
gagcagatgacggcgctggtgcgccgcgcagcaagcgggcgcgcggcactgccgcgctgg
aatggcgggcgcatgccgctgtcgaacacgctggccgatgcggtgctgcgcgagctgcag
gctgccgacgagggacgtttcaatagccccgagatgcaatgcgttcagccgctgctggag
atccagcagcgctggtcgggcctgcccacgccgcagacgctggtggccgagaccttcaag
tcgcgcgagggctggcatctgtttgtctacccgtttgcggggcgtcaggtgcacctgggc
ctggccagcctgatcgcctggcgcgccgcgcagcctcagaccggcaccttctcgattgcg
ctcaacgactatggcttcgagctgctgagcgccacgcccatcgactgggccgagcggctg
ccctcgctgctcgtgctgccgccgctcgatgagctgctcgtggaggtgctgggcagcctc
aatgccaccgagctggcgcgccggcgcttcagggaaatcgcgcgcattgccgggctgatc
ttccagagccaccccggcgagcgccgcagcaaccgccagctgcaggcctcggccgcgctg
ttctacgaggtgttccagcgctacgacccgcgcaacggcctgctggcccaggccgagcag
gagctgctgacgcaggaactcgatgtgcgccagctggcggcggcgctcgggcgcatccag
ggccagcgcctgtcgctgcatgcactgcaaaaaccctcgccactggccttcccgctgatg
gtcgagcgctttcgcgaaaagctcagcaacgagccgctggcgcagcgcatcgcgcgcatg
gtggccgagctcgagcgcagcgccggcggcgaggcggtgggcacggcgcatgcgccggcg
cagcaggtgtttgccgaacgcgagtcgcccgaatgggccatcgacgccgcgctggcgctc
gagacccgcagtgaaacccccacccggcgcaagcgcgagcgcacgcgccgcacgacaaaa
tga

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