Citrobacter enshiensis: P2W74_18805
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Entry
P2W74_18805 CDS
T09732
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
cens
Citrobacter enshiensis
Brite
KEGG Orthology (KO) [BR:
cens00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cens03019
]
P2W74_18805 (hrpB)
Enzymes [BR:
cens01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
P2W74_18805 (hrpB)
Messenger RNA biogenesis [BR:
cens03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
P2W74_18805 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
CON_HrpB
Helicase_C
AAA_22
AAA_19
ResIII
Motif
Other DBs
NCBI-ProteinID:
WET39963
LinkDB
All DBs
Position
complement(3944952..3947381)
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AA seq
809 aa
AA seq
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MTSLPVAAVLPELLTALDSAPQVLLTAPTGAGKSTWLPLQFLTHKDIQGRIILLEPRRLA
ARNVAQRLAELLNEKTGETVGYRMRAQSCVGPQTRLEVVTEGVLTRMIQRDPELNGVGMV
ILDEFHERSVQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQLLPDAPVVVSEGRA
FPVERRYQPLAAQLRFDEAVAIATADLLRSESGSLLLFLPGVGEIQRVQEHLTSRVGSDV
LLCPLYGALSLDDQRKAILPAPTGMRKVVLATNIAETSLTIEGIRLVVDSAQERVARFDP
RTGLTRLITQRVSQASMTQRAGRAGRLEPGICLHLLPKDQAQRAAAQSEPEILQSDLSGV
LMELLQWGCHDPAQLTWLDLPPATHLLAAKRLLQMLNALEGDRLSATGQKMAALGNDPRL
AAMLVSASNSSEAATAAKLAAILEEPPRGGSSDLSVAFSRHHPGWQQRSQQLLKRLNVRA
TEPDSRLIAPLLAHAFADRIARRRGLDGRYQLANGMGAKLDADDALGRHEWLIAPLLLQG
SASPDARILLALPLEIDALIQACPTLLQQSDTVEWDDAQGTLKALRRLRIGQLTVKVQPL
AKPSEDELHQAMLNGIRDKGLSVLNWTPEAEQLRLRLHCAAKWLPEYAWPVVDEASLLAS
LESWLLPQMTGVHSLRGLKAVNVGLALRSLLDWSMLQRLDSELPAHYTVPTGSRIAIRYH
DDNPPALAVRMQEMFGEAQTPTIAQGRVPLVLELLSPAQRPLQITRDLSAFWQGAYREVQ
KEMKGRYPKHVWPDDPANTAPTRRTKKYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcgttgcctgttgccgccgtactgcctgaactgctcactgcccttgatagcgcc
ccccaggtcttactgaccgcgccgaccggtgccgggaaatcaacctggctaccgctgcag
ttcctgacgcataaagacatccaggggcggattatcctgctggaaccacgccgtctggcg
gcgcgcaatgtggcgcagcgactggcggaactcctgaacgaaaaaaccggtgaaacggtc
ggctaccggatgcgggcgcaaagctgcgtggggccgcagacgcggcttgaagtggtcacc
gaaggcgtgctgacaagaatgatccaacgcgacccggagcttaacggcgtagggatggtg
atcctcgatgaatttcacgagcgcagtgtgcaggctgacctggcgctggcgttgctattg
gatgtgcagcagggactgcgcgacgatttaaaactgctgatcatgtccgcgacgctggat
aacgaccgcttacaacagctgctgccggatgcgccggtggtggtctccgaagggcgcgct
tttcctgtcgagcgccgataccagccactggcggctcaactgcgttttgatgaggcagtg
gccattgccacggcggatttactgcgcagcgagtcgggatcgttgctgctgtttttaccc
ggcgtaggggagatccaacgcgtacaggaacacctgacgtcacgcgtggggagcgatgtt
ctgctgtgcccgctctacggagcattgtcgttggatgatcagcggaaagccattttgccc
gcgccgactggtatgcgcaaagtggtgctggcaaccaatattgccgaaaccagtttaacg
atcgaagggatccgtctggtggtggacagcgcgcaggagcgcgtggcgcgttttgacccg
cgaacggggctgacgcgcctgattacccagcgcgtcagtcaggcctccatgacgcagcgg
gcgggacgtgcggggcgactggaacccggtatctgtcttcacctactgcctaaagatcag
gcacagagagcggcggcgcaaagcgagccggagattttgcaaagcgatctgtcgggcgtg
ctgatggagctgttgcaatggggatgccacgatcccgcccagctcacctggttagatctt
ccgcctgcgacccatctgctggcggctaagcggctgttacagatgctgaacgcgctcgag
ggcgatcgcctgagcgcaaccggtcaaaaaatggcggcgctcggcaacgatccccgactg
gcggcgatgctggttagcgccagcaacagcagtgaagctgcaacggcggcgaagctcgcg
gcgatacttgaagagccgccgcggggagggagcagcgatttaagcgtcgcgttttcacgt
catcatcctggctggcagcagcgcagtcagcaacttctgaaacgcctcaacgtgcgcgcc
acggaaccggacagccgtctgatagccccgttgcttgcccacgcatttgccgatcgcatt
gcgcgtcggcgagggctggacggacgctaccaactggcgaacgggatgggggcaaaactg
gatgccgatgacgcgctgggtcgccatgagtggctgattgcgccgctcttgttacaaggg
agcgcctcaccggatgcgcgtattttgctggcgctgccgctggagatcgatgcgcttatt
caggcgtgccccacacttttacagcaatccgacacggttgagtgggatgacgcgcaaggc
acgctgaaagcgctacgacggttgcgtattgggcaactgacggtaaaagttcagccgctt
gccaaaccttctgaagacgaactgcatcaggcgatgctgaatggcattcgcgataaaggc
ttaagtgtgctcaactggacgccggaagcagagcagctacggctgcgtttgcactgcgcg
gcaaaatggctgccggagtacgcgtggcctgtcgtggatgaggcctctttgctggctagc
ctggagtcctggttactgccgcagatgaccggtgtgcactctctgcgtgggctgaaagca
gtgaatgtcggtctggcgttacgcagtttactggactggtctatgctgcaacgtctggat
agtgaactgcctgcgcattacactgtgccgacgggaagccggatagccattcgctatcat
gacgataacccgcctgcgctggccgtcagaatgcaggagatgtttggggaagcgcaaaca
cctactattgctcaggggcgcgttccgctggtgctggagttattatcaccggcgcagcga
ccgctgcaaatcacgcgggatttaagcgcgttctggcagggcgcctaccgtgaggtgcaa
aaggagatgaaaggacgctatcccaaacatgtgtggccggacgatccggcgaataccgcg
ccgacgcggcgcaccaaaaagtattcgtag
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