Cyanobacterium endosymbiont of Epithemia turgida: ETSB_0108
Help
Entry
ETSB_0108 CDS
T03622
Symbol
recJ2
Name
(GenBank) ssDNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ceo
Cyanobacterium endosymbiont of Epithemia turgida
Pathway
ceo03410
Base excision repair
ceo03430
Mismatch repair
ceo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ceo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ETSB_0108 (recJ2)
03430 Mismatch repair
ETSB_0108 (recJ2)
03440 Homologous recombination
ETSB_0108 (recJ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ceo03400
]
ETSB_0108 (recJ2)
DNA repair and recombination proteins [BR:
ceo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ETSB_0108 (recJ2)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ETSB_0108 (recJ2)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ETSB_0108 (recJ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
BAP17003
LinkDB
All DBs
Position
174784..177132
Genome browser
AA seq
782 aa
AA seq
DB search
MNILQDKWQIAPSPLIPQWFLTIVKLYTPNSEGKHVAKILWQRGIQHKDQLMSFIDADAY
HPTSPFAFGEEMKWAVKRLKRAYENREKVTIWGDFDADGITSTSVLWEGLGQFFLPHLQL
DYYIPNRITESHGLNCQGIKKLAISGTRLVVTCDTGSTNLTEIDYANELGIDIIVTDHHV
LPDTRPPVTAIINPRYFSTNHSLFNLSGVAVAYKLIEAFYQELPNIPQEPLEQLLDLVAI
GLIADLVELKGDCRYLAQKGIRCLHKQQQFKTRPGIAKLLELCKKNGDRPTDISYGIGPR
INAISRIYGDATFGVELLTSRDIKLCHELAFKTELANTRRKEIQQRVYKDVKNKLSKIDL
STVKAIVLKDTQWDSGVLGLVAGKIAQEYSRPTILLTIIETDNEDEVKGIKMLRGSARSV
NQIDLYKLLDYHKNLLHRFGGHPFAVGLSLPLKNLTLFREGINQQLRQKLDHITYLKATI
EVDLIVTVVDLGQDLFRELKLLEPCGIGNSIPKILIQNCWFDNVFSNNIEDRTKNKIQYI
KTTFEIHDFSTDKGFPGVWWEHYKDELPFDKLQDTIVELYFNSYYKRYEVRLIAIRDCVD
NVELNQNTNNNNYLLDWRNKKYKEDFQKVNTQIQILQECPNSWDELLTIYHQTQQKKIKL
ALAYDSPKYINSIEVWQQLLGIAKYYSRTNEVVNIKQIKTRLELSNYTLKIGLETLYELG
FNYNKIEEKFQFRWIKKIANNAQKQVSKFLEIVDEEQFQHKYFSEVSLEYINKKIYINNK
KE
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcttgcaagataaatggcaaatagcaccatctccattaattcctcagtggttt
ctaacaattgttaaattatatactcctaattctgaaggaaaacatgttgctaaaattcta
tggcaacgaggaattcaacacaaagatcaactgatgtctttcattgatgctgatgcctat
catccaactagtccttttgcttttggagaagaaatgaaatgggcagttaaacgccttaaa
agagcttatgaaaatcgagaaaaagtaactatatggggggactttgatgctgatggaatt
acctcaactagcgttctttgggaaggattaggacaattttttcttcctcatcttcaactt
gactattatatccctaatcgtatcacagaatcacacggattaaattgtcaaggaataaaa
aaattagcaatatcaggaactcggttagttgtgacttgtgatacaggcagtactaactta
actgaaattgactatgctaatgagttaggtattgatataattgtcaccgatcatcatgtt
ttaccagatactcggccccctgttactgctattatcaaccctcgctactttagcactaat
cattctctatttaatctatcaggagtggcagtagcctataaattaattgaagcattttat
caggaattacctaatattcctcaagaaccactagaacaattattagacttagttgctatc
gggctaattgctgacttagttgagttaaaaggagattgtcgttatttagcacaaaaaggt
attcgatgcttgcacaaacagcaacaatttaaaactcgtccaggaattgctaaattatta
gagttatgtaagaaaaatggtgatcgacctactgatatttcctatggtattggacctaga
attaatgctattagtcgcatttatggagatgcaacatttggagttgaattattaactagt
cgcgatataaaactttgccacgaacttgcttttaaaaccgaattagcaaacacaagacgt
aaagaaatacaacaaagagtttataaagatgttaaaaataaactatctaaaattgacttg
tcaactgtgaaagctattgtcttaaaagatactcaatgggatagcggagttctagggtta
gttgcaggaaaaattgctcaagaatatagtcgtccaacaattttattaaccataatagaa
acagataatgaagacgaagttaaaggcataaaaatgctcagaggttcagcgcgctcagtt
aatcaaatagatttatataaattactggattatcataaaaatttgttacatcgttttgga
ggacatccttttgctgtagggttaagtttacctctaaaaaatttaactttatttagagaa
gggattaatcaacaattacgacaaaaactcgatcatattacttatttaaaagcaacgatt
gaagtagatttaattgttactgttgttgacttaggacaagatttatttcgagaactaaaa
ttattagaaccctgtggaattggtaattctattcctaaaattttaatacaaaattgctgg
tttgataatgttttcagcaataatattgaggacagaacaaaaaataaaatacagtatata
aagacaacttttgagattcatgatttttctactgacaaaggatttcctggagtttggtgg
gaacattataaagatgagcttccttttgataaactccaagatactattgttgaattatat
tttaattcttattataaacgttatgaagttagattaattgctattagagactgtgtagat
aatgttgaacttaatcaaaatactaataataataactatttgttagattggcgaaacaaa
aaatataaagaagactttcaaaaagtaaatactcaaattcaaatattacaagaatgtcct
aatagctgggatgaactattaacaatatatcatcaaactcaacaaaaaaaaattaaactt
gctcttgcttatgattcaccaaaatatataaattccatagaagtttggcaacaattatta
ggaattgcaaaatattacagtcgtactaatgaagttgtcaatataaaacaaataaagaca
agattagaacttagtaattataccctaaaaattggattagaaaccttgtatgaattagga
tttaattacaataaaatagaagaaaagttccaatttagatggatcaaaaagattgctaat
aatgctcaaaaacaagtgagtaaatttctagaaatagtggacgaagaacaatttcagcat
aaatatttttctgaagtttcgcttgagtatatcaacaaaaaaatatatataaacaataaa
aaagaataa
DBGET
integrated database retrieval system
