Cyanobacterium endosymbiont of Epithemia turgida: ETSB_0452
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Entry
ETSB_0452 CDS
T03622
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ceo
Cyanobacterium endosymbiont of Epithemia turgida
Pathway
ceo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ceo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ETSB_0452 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ceo03400
]
ETSB_0452 (fpg)
Enzymes [BR:
ceo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ETSB_0452 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ETSB_0452 (fpg)
DNA repair and recombination proteins [BR:
ceo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ETSB_0452 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Auto_anti-p27
NFACT_N
RNHCP
Motif
Other DBs
NCBI-ProteinID:
BAP17307
UniProt:
A0A077JEF9
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All DBs
Position
complement(714105..714953)
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AA seq
282 aa
AA seq
DB search
MPELPEVETVRQGLNRLTLGTTIQGGEVLLNRTLAYPLSVTEFLTQITNVTVSGWERRGK
YLLGRLRKKSGKNGGFLGVHLRMTGQLLWLNRLEPLQTHTRLRLFCDKAQELRFVDVRTF
GRLWWVPQNQNPEIIITGLKKLGPEPFSEEFSLGYLTERLRTSQRNIKSLLLDQGIVAGL
GNIYTDEALFKSGIRPTVMAKNLNCKQLQRLRISIIEVLKEAIDKGGTTFSDFRGVTGIN
GNYGKIAWVYGRTGESCRVCGTAIERLKLGGRSAHFCPQCQR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtgccagaacttcctgaagtagaaactgttcgtcaaggtcttaatcggctaactttagga
acaacaatacaaggtggcgaagtattactgaatcgtactctcgcttatcctttatcagtt
acggaatttttaacccaaattaccaatgtcaccgttagtgggtgggagcgacgagggaaa
tatttattaggaagattgagaaaaaaatccggcaaaaatgggggttttttaggcgttcat
ttacgaatgaccggtcagttattatggttgaatcgacttgaacccctacaaacacatacg
cgtttacgtttgttttgtgataaagctcaagagctacgttttgttgatgttcgcactttt
ggtagactatggtgggttccccaaaaccaaaatccagaaataattattacggggttaaaa
aaattgggtcctgaacctttttctgaagaattttctttaggttatttaaccgaaagatta
agaactagtcaacgcaatattaaaagcctgttattggatcaaggtatcgtagcaggatta
ggaaatatttatacagatgaggccttattcaagagcggtattcgaccgactgtaatggct
aaaaatttaaattgcaaacaacttcaaaggctaagaatatcaattattgaagtattgaaa
gaggctatcgataaaggaggaacaacctttagtgattttcgaggagtgacgggaatcaat
ggtaattatggaaagattgcctgggtctatggtcgcacaggggaatcctgtcgagtttgt
ggaacagccattgagcgcttaaaattaggcggacgttctgcacacttttgcccgcaatgt
caaaggtaa
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