Cyanobacterium endosymbiont of Epithemia turgida: ETSB_0522
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Entry
ETSB_0522 CDS
T03622
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ceo
Cyanobacterium endosymbiont of Epithemia turgida
Pathway
ceo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ceo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ETSB_0522 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ceo03021
]
ETSB_0522 (rpoA)
03400 DNA repair and recombination proteins [BR:
ceo03400
]
ETSB_0522 (rpoA)
Enzymes [BR:
ceo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ETSB_0522 (rpoA)
Transcription machinery [BR:
ceo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ETSB_0522 (rpoA)
DNA repair and recombination proteins [BR:
ceo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ETSB_0522 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
KH_PARP14_8
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BAP17369
UniProt:
A0A077JCA9
LinkDB
All DBs
Position
786865..787815
Genome browser
AA seq
316 aa
AA seq
DB search
MVVAQFQIECVESKTQKNQSQYSKFALEPLERGQGTTMGNALRRVLLSNLEGTSVTAIRI
AGVNHEFATIPGVREDVLEIMLNMKEIVLKSYSDKPQIGRLVARGEATVTAANFELPSEV
EAVDPTQYIATLTEGAKLEMEFRVERGTGYKGISRHKDESSSLDFLQIDAVFMPVTKVNY
SVEDIRGDGAEPKDRLILEIWTNGSFNPKDALSEAAEIVVDLFSPLKDLNQLETSSPDYQ
DDDNPQSQIPIEELQLSVRAYNCLKRAQINTVADLLDYSQEDLLEIKNFGQKSAEEVIEA
LQKRLGITLPQEKTKP
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtggcgcagtttcaaattgagtgtgttgagtctaagactcagaaaaatcaaagt
caatatagtaagtttgccctagagcctctagaaagaggacaaggaacgacaatgggtaat
gctctgaggcgagtattactatctaatttagagggaacatcggtcacggcgattcgcatt
gcgggagttaaccacgagtttgctaccatcccaggggttagagaggatgtattagaaatc
atgttaaacatgaaggaaattgtccttaaaagttatagtgataagccgcaaattggccgc
ctggtagcaagaggagaagctacggtaactgcggcaaattttgagttaccctcagaagtg
gaagctgttgatccaacccagtacattgctaccctgacagaaggggcaaagttggagatg
gaatttcgagtagaaagaggaaccggatataagggaatttcccgccacaaagatgaatct
tcttctctggatttcttgcagatcgatgcagtttttatgccggtcaccaaagttaattat
agtgtagaagacattaggggagatggggctgagcctaaagacagactgattttagagatc
tggacgaatggtagttttaatccaaaagatgctctttccgaagcagcagagattgtagta
gatttatttagtcctcttaaagatcttaatcaacttgaaactagttctcctgattatcaa
gatgacgacaatcctcaaagtcagattcctattgaagaactacaactttcggtgcgagct
tacaattgtctaaaaagggcacagataaatacagttgcagatttattggattatagtcaa
gaggaccttctcgaaattaagaattttgggcagaagtctgctgaagaagtgattgaagct
ttacaaaaacggttgggcattactttacctcaggaaaaaactaaaccttga
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