Cyanobacterium endosymbiont of Epithemia turgida: ETSB_0530
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Entry
ETSB_0530 CDS
T03622
Symbol
dnaE2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ceo
Cyanobacterium endosymbiont of Epithemia turgida
Pathway
ceo03030
DNA replication
ceo03430
Mismatch repair
ceo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ceo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ETSB_0530 (dnaE2)
03430 Mismatch repair
ETSB_0530 (dnaE2)
03440 Homologous recombination
ETSB_0530 (dnaE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ceo03032
]
ETSB_0530 (dnaE2)
03400 DNA repair and recombination proteins [BR:
ceo03400
]
ETSB_0530 (dnaE2)
Enzymes [BR:
ceo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ETSB_0530 (dnaE2)
DNA replication proteins [BR:
ceo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ETSB_0530 (dnaE2)
DNA repair and recombination proteins [BR:
ceo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ETSB_0530 (dnaE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
BAP17377
UniProt:
A0A077JEN0
LinkDB
All DBs
Position
794221..796908
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AA seq
895 aa
AA seq
DB search
MSFVGLHIHSEYSLLDGASQLNALVDRALELEMPAIALTDHGVMYGVIELMKVCRNKGIK
PIIGNEMYVINEDIEVNKRHKRYHQVILAKNTQGYRNLVKLTTISHLKGIQGKGIFSRPC
INKKLLEQYHEGLIVTSACIGGEIPQKILSGDFKEAQRIAKWYQKLFKDDFYLEIQDHGS
QEDRIVNREIIKIADELDIKIIATNDSHFISCYDVEAHDALLCIQTQKLITEDKRLRYSG
TEYLKSAEEMRLLFRDHLPKSVIEDAINNTLEVANKIEHYKNIFGEPRIPNYPVSSGHNP
DSYIEKIAWEGLIERLKCRSRKEISDNYKERLGYELKMLQKMGFSSYFLVVWDYIKYARD
HKIPVGPGRGSAAGSLVAYSLKITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIERRDE
MIKYVTEKYGEANVAQIITFNRMTSKAVLKDVARVLNIPYADSDKMAKMIPVLRGKPTKL
KAMISNETPEPKFKEAYDNQEVDIKDDKKNVIGKIPVRNWVDMAIRIEGTNKTFGVHAAG
VVISSEPLDEIVPLQRNNEGAVITQYFMEDLESLGLLKMDFLGLRNLTTIQKTADLIKQN
RNIDLDLDQLPLEERKALQILGKGTAKKLPDDIDKTYKLLERGDLEGIFQLESSGMKQIV
KELKPSKIEDISAILALYRPGPLDAGLIPKFIARKHGKEAIQYEHFLLESILEETYAVLV
YQEQIMKMAQDLAGYSLGEADLLRRAMGKKKISEMKKHREIFIDGATKNGVSSNVAENLY
EQMVKFAEYCLSYDTEVLTVEYGAIPIGRMVEESLDCTVYTVDKNGFVYTQSIQQWHSRG
QQEIFEYCFEDGSIIRATKDHKFMTAEGKMSSIHDIFEQGLELKKIIPWSGDNKS
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgttggtttacatattcacagtgaatatagtctacttgatggagcgtctcaa
ctcaatgctttagttgatcgtgctttggaattagaaatgccagctattgctctaactgat
catggagtaatgtatggagtgatcgaactcatgaaagtttgccgtaataaaggaattaaa
ccaattatcggcaatgaaatgtatgttattaatgaagatattgaagttaataaacgccat
aaaagatatcatcaagttatcttggctaaaaatacccaaggctatagaaatttagtaaag
ttaaccactatatctcacctcaagggtattcagggaaaggggattttttctcgcccttgt
attaataaaaaattattagagcaatatcatgaagggttaattgttactagtgcttgtata
ggaggggaaattcctcaaaaaattttatcaggagattttaaagaggctcaacggattgct
aaatggtatcaaaagttgttcaaagatgatttttacttagaaatccaagatcatggttca
caagaagatcggattgttaatcgagaaattatcaaaattgctgatgaattagacattaaa
attattgcaactaatgactctcattttatctcctgctatgacgtagaagctcatgacgca
ttactttgtattcaaacacaaaagttaattacagaagataaacggcttagatatagtgga
actgaatatcttaaatctgcagaagaaatgagattattattccgagatcatcttcctaag
agtgtgattgaagacgcaataaataatactttagaagttgctaataaaattgaacattat
aaaaatatttttggagaacctcgtattcctaattatcctgtttcttcaggacataatcct
gatagttatattgaaaaaatagcttgggaagggttgatagaaaggctaaaatgtcgttct
cgtaaagaaatctcagacaattataaggaaagattaggatatgaattgaaaatgttgcaa
aaaatgggattttctagttattttttagtagtttgggattatattaaatatgcaagagat
cacaaaattcctgtgggacctggaagaggatctgctgcaggttctttagttgcttattct
ttaaaaataactaatatagatccagttcatcacggacttttatttgaaagatttttaaat
cctgaacgaaaatctatgcctgatattgatacagatttctgtattgaaagacgagatgaa
atgattaaatatgtcaccgaaaaatatggagaagccaatgttgctcaaattattactttt
aaccgcatgacttctaaagctgttttaaaagatgtagctagagtgttaaatattccctat
gcagactccgataaaatggcgaaaatgattccagttttacgtggaaaacccactaaatta
aaagcaatgatttctaatgagacaccagagccaaaatttaaagaagcttatgataatcaa
gaagtagatattaaagatgataaaaaaaatgtgattggtaaaatccctgtgcgtaattgg
gtggatatggcaattcgcattgaaggaactaataagacctttggagttcatgctgcaggt
gtagttatttcttctgaacctttagacgaaatcgtacctcttcaaaggaataatgaagga
gcagttattactcagtattttatggaagatttagagtctctaggattgttaaaaatggac
tttttggggttaagaaatttaacaactattcagaaaacagcagatttaattaagcaaaat
agaaatatagacttagatttagatcaactacctttagaagaaagaaaagccttacaaatc
cttggtaaaggaactgctaaaaaacttcccgatgatatagacaaaacctataaactttta
gaaagaggggacttagaaggaatttttcagttagaatcatcaggaatgaagcagatcgtt
aaagaactaaaaccatcaaaaattgaagatatttccgctattttagctctttatcgtcct
ggtcctttggatgctggacttattcctaaatttattgctcgtaaacatggaaaagaagcg
attcaatatgaacattttttattagaatccattcttgaagaaacctatgctgtcttagtt
tatcaagaacaaatcatgaagatggcgcaagatttagcgggttattctttaggagaagcc
gatttattacgtcgagcaatgggaaaaaagaaaatctcagaaatgaaaaagcatcgagag
atttttattgatggagcgactaaaaatggagtttctagtaatgttgcagaaaatttatac
gaacaaatggttaagtttgcggaatattgcttaagttatgatacagaagtattaaccgtc
gagtatggagcaattcccatcggtagaatggtagaggaaagtctcgactgtactgtttat
acagtagacaaaaatggttttgtttacactcaatctattcaacaatggcattcacgaggt
caacaagaaatatttgaatattgttttgaagacggttccatcattcgagcaacaaaagac
cataaatttatgactgccgaaggaaaaatgtcttctatccatgatatcttcgaacaagga
ttagagttgaagaaaattataccctggtccggtgataacaaaagctag
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