Cyanobacterium endosymbiont of Epithemia turgida: ETSB_0712
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Entry
ETSB_0712 CDS
T03622
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ceo
Cyanobacterium endosymbiont of Epithemia turgida
Pathway
ceo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ceo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ETSB_0712 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ceo03400
]
ETSB_0712 (xthA)
Enzymes [BR:
ceo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ETSB_0712 (xthA)
DNA repair and recombination proteins [BR:
ceo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ETSB_0712 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
BAP17534
LinkDB
All DBs
Position
complement(1046015..1046803)
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AA seq
262 aa
AA seq
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MRIATWNVNSIRIRQPHVIDWLNSSCVDALCLQETKVVDHDFPKSTFEKLGYHVYIYGQK
SYNGVAILSRQPLEDVNTGFSPIIKDFLLEEFDEQKRVITGILEDVRIVNLYVPNGTSVG
SEKYNYKLRWLKVLKQYVANILDKSNQKLCICGDFNIALEDRDIYNYKSKENHIMSSPLE
REALQDILSLGLKDAFRKFTSGGEYFSWWDYRAGGFQDNRGWRIDHHYLTPTLYEKAISC
TIDIEPRKLIKPSDHAPVIVEF
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgctacctggaatgttaactcaattcgtattagacaaccccatgtcatagac
tggttaaatagtagttgtgtggatgctctttgtttacaagaaactaaagtggttgatcac
gattttcctaaaagcacttttgaaaaattgggttatcacgtttatatttatggacaaaaa
tcctacaatggagtcgctattctcagtcgtcaacccttagaagatgttaacactggattt
agtcctattattaaggattttttattagaagagtttgatgagcaaaaacgagttattaca
ggaatcttagaggatgtaaggatcgtcaatttatatgtccctaatggtacttctgtagga
agtgaaaaatataactataagttacggtggttaaaagtcctaaaacaatatgtagctaat
attttagataaatctaatcaaaagttatgtatttgtggagattttaatattgccttagaa
gatagagatatttataactataagtctaaagagaatcatattatgtcttctccgttagaa
cgggaagctttacaagacatcctttcgttaggattaaaagatgcctttcgaaaattcaca
tcaggaggtgagtattttagctggtgggactatagagcgggcggatttcaggacaatcgc
ggatggcggattgatcaccattatcttaccccaacactttatgaaaaagctattagttgc
actattgatattgagccaagaaaattgataaaaccgagcgatcatgctccagttattgtt
gaattttaa
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