Cyanobacterium endosymbiont of Epithemia turgida: ETSB_1031
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Entry
ETSB_1031 CDS
T03622
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ceo
Cyanobacterium endosymbiont of Epithemia turgida
Brite
KEGG Orthology (KO) [BR:
ceo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ceo03016
]
ETSB_1031 (rnd)
Enzymes [BR:
ceo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ETSB_1031 (rnd)
Transfer RNA biogenesis [BR:
ceo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ETSB_1031 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BAP17817
UniProt:
A0A077JFT6
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All DBs
Position
complement(1518447..1519079)
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AA seq
210 aa
AA seq
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MLNLTNFQVEDCDLSDDTLRRYSTTTSIAVDTETMGLIPQRDRLCLIQLCDSDGFVTAIR
IRIGQTEAPNLKQLMESRKVIKVFHYARFDVAQLLYSFKIHTKPIFCTKIASKLARTYTN
SHGLKNLVQELEGIELDKSPQSSDWGNVSSLSEAQLNYAANDVLYLLSIQEKLTTMLKRE
ERWQLAQNCFDCIPTFVDLDLGQYREIFEH
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatttaacaaattttcaagttgaagattgtgatttatctgatgatactttacgt
cgctattcaaccactacatctattgcggtagatacagaaaccatgggcttaattccccaa
cgtgatcgtctctgtttaatccaattatgtgattctgatggatttgttacggctattcgc
attagaataggacagacagaagcccccaatttaaaacagttaatggaatctagaaaagtt
attaaggttttccattatgcacgatttgatgtggcgcaattattgtattcttttaaaatt
catactaaaccaattttctgtaccaaaattgctagtaaattagctcgtacttatactaat
tctcatggattaaaaaatttagtacaggaattagaaggtattgaattggataaaagtccc
caaagttcagactggggaaacgtttctagtttatcagaggcacaattgaattatgcagca
aatgatgttttgtatctactatccattcaggaaaaattaacgactatgttaaaacgagaa
gaaagatggcaactagcccaaaattgttttgattgtattcccacttttgtagacttagat
cttggacaatatagagagatttttgagcactga
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