Cyanobacterium endosymbiont of Epithemia turgida: ETSB_1512
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Entry
ETSB_1512 CDS
T03622
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ceo
Cyanobacterium endosymbiont of Epithemia turgida
Pathway
ceo03420
Nucleotide excision repair
ceo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ceo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ETSB_1512 (pcrA)
03430 Mismatch repair
ETSB_1512 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ceo03400
]
ETSB_1512 (pcrA)
Enzymes [BR:
ceo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ETSB_1512 (pcrA)
DNA repair and recombination proteins [BR:
ceo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ETSB_1512 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
ETSB_1512 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
DEAD
PcrA_UvrD_tudor
AAA_11
AAA_30
DUF1978
CarD_TRCF_RID
Exog_C
Motif
Other DBs
NCBI-ProteinID:
BAP18248
UniProt:
A0A077JKV6
LinkDB
All DBs
Position
complement(2169964..2172294)
Genome browser
AA seq
776 aa
AA seq
DB search
MTVNNDFLAELNTSQRLAVEHFCGPLLVAAGAGSGKTRALTYRIAYLISYHHVEPDSILA
VTFTNKAAREIKKRIEKLFAQEMAINNNGQRFDLLSEDKQKKFVSQVYKTTTKKLWLGTF
HSLCAKILRFDINKYKDERGRQWQRNFSIFDESDVQSLIKNIVTKQFNLDDKKFDPRSVR
YQISNLKNLGLSPDKYLKQDSSYKNRVIAEVYNEYQLQLATNNALDFDDLILVPVRLFQQ
NESILGYWHNQFKHILVDEYQDTNQIQYELISLLTTNGETRKSEWSWQNRSIFVVGDTDQ
SIYSFRMADFTILLNFQSDFGDGLPDEDTRTMVKLEENYRSRENILQAANYLIKNNTQRI
DKTLKATRGLGEYIYCYQADNEQIESKIVINKIKTLVKENPELNWGNFAILYRINAQSRP
FEDCLINNNISYKIVGGFKFYDRQEIKDALAYLRLIANPADIVSLLRIINIPRRGIGKTS
IDVLIKAAQELEIPLWEIISDATSVNTLIGRAAKSINNFAKMIKYFQKKITSLSGAEILN
QVMEISGYIDNLKQKKTEEANNRLENISELYNAILQFQKDTEDINLQGFLSNASLSSDID
DLKEEQEKVSLMTLHSAKGLEFTVVFLVGLEQGLLPHIRSLNDSLALEEERRLCYVGLTR
AQEQLFLTYARERFVWGSKETKIPSQFLKELPSDLIKSDFLNSLKVYHQSDTFKAKTLQT
YNQQWSVGDRLIHPNFGIGEVTHILGAKKTINLAIQFLELGQKIINPRVTLMEKID
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgactgttaataatgactttcttgccgaacttaatacttcacaacgtctagctgttgaa
cacttttgcggacctttattagtggcagctggtgctgggtcaggcaaaactagagccctc
acttatagaattgcctatttgattagttatcatcatgttgaaccagactccatcctagct
gttacttttacgaataaagcagcgagggaaataaaaaagcgaattgagaaactatttgcc
caggaaatggctattaacaataatggacaacggtttgatcttctctctgaagataaacaa
aaaaaatttgtatcacaagtttataaaacaactactaaaaagctttggcttggaactttt
catagtttatgtgcgaaaatattgcgctttgatatcaataaatataaggatgaacgagga
cgacaatggcagcgaaatttttcaatttttgatgaatctgatgtacaaagtctaattaaa
aatattgtaactaagcaatttaatttagatgataaaaaattcgatcctcgctcagtacgc
tatcagattagtaatcttaaaaatttaggattatctcccgataaatatcttaaacaagac
tcttcttataaaaatcgtgttatcgccgaagtttataatgagtatcaattacaactagcg
accaataatgccttggactttgatgacttgattctagttcccgttagactatttcagcaa
aatgaatctatccttggctattggcataaccaatttaagcatattttagttgatgaatat
caagatactaatcaaattcaatatgaattaattagtttattaacaactaatggagaaact
agaaaaagtgaatggagttggcaaaatcgttctatttttgtcgtaggtgatactgaccaa
tctatttacagctttcgcatggcagattttaccattttattgaattttcaatcagatttt
ggagatggtttgcccgatgaagatacccgtaccatggtcaaattagaagaaaattatcgc
tcaagagaaaatatattacaagcggctaattacttgatcaaaaataacacccaacgcatt
gataaaactttaaaagctacacggggactaggagaatatatttattgctatcaagcagat
aatgaacaaatagaatcaaaaatagtgatcaataaaataaaaaccttagtaaaagaaaac
cctgaactaaattggggaaattttgcaattctttatcgaattaatgctcaatctcgtcct
tttgaagattgcttaattaacaataatatttcctataaaattgtaggaggatttaaattt
tatgatcgccaagaaatcaaagatgctttagcttatttacgcttaattgctaatcctgca
gatatcgttagtttactaagaattattaatataccccgtagaggaattggtaaaacttct
atagatgttttaattaaagcagcccaagaattagaaatccctctttgggaaattatttct
gatgctacttccgttaatactctaataggaagagcagcaaaatcaatcaataattttgct
aaaatgattaaatattttcagaaaaaaataactagtttgtcaggagcagaaattcttaat
caagtaatggaaatttctggatatattgataacttaaaacagaaaaaaactgaagaagct
aataatcgcttagaaaatatttctgagttatataatgctattttacaattccaaaaagat
acggaagacattaatctacaaggatttttatctaatgcttccctctcgtctgatattgat
gatttaaaagaagaacaagaaaaagtgtctttaatgactcttcattcagctaagggatta
gaatttacggtagtatttttagttggtttagaacaaggattattacctcatattcgtagt
ttaaatgattctctagccttagaagaagaacgtcgtttgtgttatgttggattgactcgt
gcacaggagcaattatttttaacctatgctagagaacggtttgtttggggatcaaaagaa
actaaaattccatcacaatttttaaaagagttaccttcagatttaattaaaagtgatttt
ttgaatagtttaaaagtttatcatcaatctgacacatttaaagctaaaactcttcagaca
tataatcaacaatggtcagtgggagatcgtctaattcatccaaattttggaatcggagaa
gtgactcatattttaggagcaaaaaaaacaattaacttagccattcaatttttagaactc
ggacaaaaaattattaatcctagagtgacgttaatggaaaaaattgattaa
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