Cyanobacterium endosymbiont of Epithemia turgida: ETSB_1691
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Entry
ETSB_1691 CDS
T03622
Name
(GenBank) putative transport protein
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
ceo
Cyanobacterium endosymbiont of Epithemia turgida
Pathway
ceo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ceo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ETSB_1691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ceo03019
]
ETSB_1691
03016 Transfer RNA biogenesis [BR:
ceo03016
]
ETSB_1691
Enzymes [BR:
ceo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ETSB_1691
Messenger RNA biogenesis [BR:
ceo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ETSB_1691
Transfer RNA biogenesis [BR:
ceo03016
]
Prokaryotic type
tRNA degradation factors
ETSB_1691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
OB_HELZ2
OB_Dis3
DUF6000
Motif
Other DBs
NCBI-ProteinID:
BAP18403
UniProt:
A0A077JLF9
LinkDB
All DBs
Position
complement(2449145..2451400)
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AA seq
751 aa
AA seq
DB search
MEFSIATLLSNFTDDKLVAAKFLEKKLGCEDEESIEKLQIILDILEKIGVLVKERGKYRR
SIEKNLVEAKLRCSSKGFCFAIQDEEDADDIYIRETHLSNAWNSDRVLVKVIKEGTRRRS
PEGEVKLILERANPSLLAQVKKDNGDYKAIPLDDRLLFELLLKQNEENSLEQAVNHLVHV
SVIRYPIGEHPPWGTITRILGSDAEEAADTDIVCCKHDLPQIFPEAVERLAEALPKTVDR
AEIDRRVDLRQKFTFTFVEDEQRDHPPFVETAFTLEQIPDQYWQLGVHITDVAHYVTPDS
LLDKTAKKRGTTIYLGDKVLPLLPKALTDCCCIVPEKDCLTISVLITFDKNGQMTEFEIH
PTVINVNEQLTYQEAQGLLTHFDQLSAEQEELAQCLKQLFLTLSPLVKAQRLQRGGFELQ
LEPRSPYQDEGRLGVIIASSKVPVRSLLMELIILAGKSVADHLYALGIPSLYCAQPEPDW
EELEDLLKLVDNLGIDIQLSSEEEITAQDYYNLTRGFNQCSSVRVLNFLLKDTLKSAKYS
SHSAPHFGLAYHDCYTHCVSPGQRYGDLLVQRMIKLLFSEGRDRRTKQTKTGVDLHSSRC
HIDINWNVLPPAIQESLEEEFHILVSHLNDREKLAEDAEKDLDGLKKAEKMKERTGQVFR
GLITGVQSYGFFVEIEDLLVEGLVHVSSLKDDWYEYRARHGCLVGRKNRIAYRLGDEVEV
EVKSVDYYRQQIDLVTVGGGSFARNDDWDDD
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggaattttcaatcgctacacttttgtccaattttacagatgacaaattagttgcggct
aaatttctggagaaaaagttggggtgtgaagatgaagaaagcatcgaaaagctccaaata
attttagatattctagaaaaaatcggagttttagttaaggagagaggaaaatatcgccgt
tctattgagaaaaatctggttgaagctaaattacgttgttcaagcaaaggtttttgtttt
gcgattcaagatgaagaagacgctgatgatatctatatacgagaaacccatcttagcaat
gcgtggaacagtgaccgcgtccttgtcaaagtgattaaagaaggcactcgtcgtcgttct
ccagaaggagaagttaaactgattttggaacgggcaaatccatctttacttgctcaagta
aaaaaagataatggagattataaagcgattcctctcgatgatcgcttattatttgaactt
ctacttaaacagaatgaggagaatagtttagaacaagcagtcaaccatttagttcacgtc
tcggtaatacgctatccgattggagaacatcccccctggggaactattacccgcatttta
ggaagtgatgccgaagaagctgctgatacagatatcgtctgttgtaaacacgatttgccc
caaattttccccgaagcggtggaacgactggcggaagctttaccaaaaactgttgatcga
gctgaaattgataggcgggttgatttacgtcaaaagtttacgtttacctttgttgaagat
gagcaacgagaccaccctccttttgttgaaacagcttttacgcttgaacaaattcccgat
cagtactggcaattaggtgttcatattactgatgttgcccattatgttacccctgattcg
ctcctcgataaaacggcaaaaaaacgagggacaacgatttatctaggtgacaaagtcctt
cccttattgccaaaggctttaactgactgttgttgtattgtcccagaaaaggattgttta
accatctcagtgttaattacctttgataaaaatggtcaaatgactgaattcgaaattcac
ccaacagttattaatgttaatgaacaactgacctaccaagaagctcaagggttattaacc
cattttgaccagctgtctgccgaacaagaagaattagctcaatgtcttaagcaactattt
ttgactcttagtcccttagttaaagcacaacggttgcaacgaggagggtttgaactacag
ttagagccgcgatcaccttatcaagatgaaggacgtttaggagtcattattgcttcatcg
aaggttcctgtgcgctcgctgttgatggagttgataatcctagcaggaaaatcggtagcg
gatcatctttacgctttaggaattccttccctttattgtgctcaacctgagcctgattgg
gaagaattagaagatttactgaaactggtagataatttaggaatagatatacaactgtct
tccgaagaggagattaccgctcaagattattacaatttgactcgaggatttaatcaatgt
tcatcggtgcgggtgttaaattttcttttgaaagataccctaaaatctgctaaatacagc
agtcattcggctccccatttcggcttagcttatcatgactgttatactcattgtgtttct
cctggtcaaagatatggagatttattagtacaacgtatgattaagttattattcagtgaa
gggcgtgatcgtcgtaccaaacagactaaaacaggggtagatctccacagcagtcgttgt
catattgatattaactggaatgttttaccccctgctatacaagaaagtcttgaagaagaa
tttcacattttagtttctcatcttaacgaccgtgaaaagttagctgaagacgcagaaaaa
gatctcgatggcttgaagaaagctgaaaaaatgaaagaacgcactggccaagtttttcga
gggttgattacgggagttcaatcttatggcttctttgtcgaaattgaagacctattggtg
gaaggactagttcatgttagttctttaaaagatgattggtatgaatatcgcgctcgtcat
ggttgtttagtgggacgaaaaaatcgcattgcttatcgtttaggcgatgaagttgaagta
gaggtaaaaagtgtagattattatcgccagcagattgatttagtaactgtcgggggtgga
agcttcgctagaaatgatgattgggacgatgactaa
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