Cyanobacterium endosymbiont of Epithemia turgida: ETSB_1724
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Entry
ETSB_1724 CDS
T03622
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ceo
Cyanobacterium endosymbiont of Epithemia turgida
Pathway
ceo02024
Quorum sensing
ceo03060
Protein export
ceo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ceo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ETSB_1724 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ETSB_1724 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ETSB_1724 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ceo02044
]
ETSB_1724 (ffh)
Enzymes [BR:
ceo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ETSB_1724 (ffh)
Secretion system [BR:
ceo02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ETSB_1724 (ffh)
Eukaryotic Sec-SRP protein
ETSB_1724 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
6PF2K
AAA_24
cobW
AAA_16
nSTAND3
APS_kinase
ParA
AAA_33
ArsA_ATPase
AAA_30
ATP_bind_1
ResIII
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BAP18436
UniProt:
A0A077JHZ5
LinkDB
All DBs
Position
complement(2484283..2485719)
Genome browser
AA seq
478 aa
AA seq
DB search
MFDALAEHLEDAWKKVRGQDKITETNIQEALIQVRRALLEADVNLQVVRNFVANVEKAAV
GAEVITGVRPSQQLIKIVYDELVKVMGTSNVSLAKAETSPTVILMAGLQGTGKTTATAKL
ALYLHKEKRSCLMVAADVYRPAAISQLIALGQQIKVPVFELGSEANPVDIARQGVEKAKG
MGLDTVIVDTAGRLQIDESMMVELIRIKDAIKPDDILLVVDAMTGQEAANLTRTFHEQIG
ITGAILTKMDGDTRGGAALSIRQISEKPIKFIGVGEKVEALQAFYPDRMASRILNMGDVL
TLVEKAQEEIDIADLEKMQSKIVEAKFDFNDFLKQMHLMKNMGSLGGLLKMIPGMNKLND
IDIEKGETELKRTEAMISSMTFEERINPDLLAKSPSRRRRIARGSGHSETKVGELVKNFT
RMRSMMQQMGQGRMPPMSEIGSGMFAGIGGQIPPGFRGHGSTKKKKKKIKKKKGFGQL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgctctcgccgaacatttagaagacgcttggaaaaaagtacgcggtcaagat
aaaatcactgaaactaacatccaagaagctcttatacaagtgcgtcgcgctttactagaa
gcagatgttaacctccaagtagtcagaaattttgtcgcaaatgttgaaaaggcggccgtc
ggtgcagaggtaattactggggttagacctagtcaacaattgataaaaattgtctatgac
gaattagtaaaggtgatggggacaagtaatgtgtcccttgctaaagctgaaacgtctccc
acagtcatcttgatggccgggttgcaagggacaggaaaaaccactgctactgctaaactt
gcgctctatcttcataaagaaaagcgtagttgcttaatggtagctgctgatgtctaccgt
ccggcagctatcagccagttgattgcccttggacaacaaattaaggttcctgtctttgaa
ctcggaagtgaagcaaaccctgttgatattgctcgtcaaggggtagaaaaagctaaggga
atgggattagatactgtgattgttgacactgccggacgactgcaaattgacgaaagtatg
atggtagaactaatccggatcaaagacgccatcaaacctgatgatattctcctggtagtc
gatgccatgacaggtcaagaagcggctaacctaacccgaacctttcatgaacaaattggc
attaccggcgcaattcttactaaaatggatggggatacgcgcggaggagcagctctatct
attcgtcaaatatcagaaaaaccaattaaatttattggagttggggaaaaggtagaagcc
ttacaagcattttatcctgatcgcatggcatcccgtattttaaacatgggagatgttctg
actttagtcgaaaaagctcaagaagaaatcgatattgcagatctagaaaaaatgcaatca
aaaattgttgaggctaaatttgattttaatgactttcttaaacaaatgcacctgatgaaa
aatatgggatcattaggaggtcttttgaaaatgattccagggatgaataaactcaatgat
atagacattgagaagggagaaactgaacttaagcgaactgaggcgatgatcagttccatg
acctttgaagaacgaataaatcctgatttattggctaagtcccccagtcgtcgtcgtcgt
attgccagggggtcaggccattctgaaactaaagtcggagaattggtcaagaattttacc
cgtatgcggagtatgatgcagcaaatgggacaaggaagaatgccccctatgtctgaaata
ggcagcggaatgtttgcgggtataggtggacaaatacctccagggtttcgtggtcatggt
agcacgaaaaaaaagaagaagaagatcaagaaaaaaaaaggatttggccaactttaa
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