Cyanobacterium endosymbiont of Epithemia turgida: ETSB_1900
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Entry
ETSB_1900 CDS
T03622
Name
(GenBank) putative exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ceo
Cyanobacterium endosymbiont of Epithemia turgida
Brite
KEGG Orthology (KO) [BR:
ceo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ceo03400
]
ETSB_1900
DNA repair and recombination proteins [BR:
ceo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ETSB_1900
Archaeal homologous recombinant proteins
ETSB_1900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SbcC_Walker_B
SMC_N
AAA_27
AAA_29
Rad50_zn_hook
AAA_21
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BAP18588
UniProt:
A0A077JLZ5
LinkDB
All DBs
Position
2729674..2732700
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPLELTLKNFLSYREATLDFRGLHTACICGANGAGKSSLLEAITWVIWGKSRAVIDDDV
IHTGCKYVRVDFQFISNQEVYRIIRNRHRGRSSHLEFQIESSGEFRSLTSKGTRATQEKI
VSSLKLDYETFINSSYLRQGRADEFMLRRPTERKQILADLLQLEQYQELSNRAKDLSKQC
QGRSQQIELSLVPIKEKLENIKYIQEQQVILVEQIQNLKFNQDKQKTKLWQLQGEEQQRK
TWSNQLDWQEQQYKKLVEDKQRLQKEKDEINQQMYRLMIIINQEDNIIKGHQQLSELQKE
EKSLSLKFKVYQEQTEREQLLTSKLNKKHSVIELQIHQAKTQLDILEQQEKELQDILKNS
DEVKTTLQHLYNHRRHLSELDRLQYKVAPIQQRYYGLQSEIKQVKANLKAELEQLYISET
DCLNQVDKIAKIRESALEIYTKIQNLNNKKVYQKRVEEKGQKQREYQERLRENQRIFKEK
IEELQQKLQKLNLPNSTCPLCEQPLNETHLNHVISKTKLQEQEIKDKILILQENMSLVEK
ELKTLRGEFTQLNKDLAAYPLLQKKFGQLEAQLETIEAVNFKLKQVRDKIKEIEQKLNQN
SYAVDLQSELNILNQELKYLNYDEQTHVLVRGEVERLRKAEVKQAKLEDANHRQSIISQQ
KPQLIQKISVLKQEIKDLYQTSKIKQEIEEIKQSIQNLGYNNLDHQKLLKSLRESQSWEL
KLQELQQAKQQYPQLQNRLEIVEIRLSDNLTEQKKIKQEIDILSFKIKSTVDQREVIAVL
EKSIQSQRQKLDELLANRGRLEQSISQLESLKQQYTDDKKQLKDIYRKYRVYTELAKAFG
KNGIQALMIENILPQLEAETNQILTRLTDNQLHIQFFTQRQGRSGSSRKKTTKIIETLDI
LISDFQGTRSYETYSGGEAFRINFSIRLALAKLLAQQAGTSVQMLIIDEGFGTQDAQGCE
QLIAAINAIASDFSCIFSVTHMPRFKEAFQCRIEVYKDNQGSQLELVS
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgattcccctcgaacttacactaaaaaactttcttagctatcgagaagcaaccctagat
tttcgagggttacatacagcctgtatctgtggtgcaaatggtgcaggaaaatcatcttta
ctcgaagcaattacctgggttatttggggtaaaagtcgcgccgtaattgatgatgatgtt
attcatacaggatgtaaatatgtgcgagttgattttcaatttattagtaatcaagaagtt
tatcgaatcatccgtaatcgtcatcgaggacgtagtagtcatctagaatttcaaatagaa
agttcaggagaatttcgttcattgactagcaaaggaacacgagctactcaagaaaaaata
gtttcctccttaaaactggattatgaaacgtttattaattcatcatatttacgtcaagga
agagctgatgaatttatgttacgtcgtccaacagaacggaaacaaatattagcagattta
ttacagcttgaacagtatcaagaattatctaatagagcaaaagatttatctaaacaatgt
cagggacgatctcaacaaattgaattgagtctagtacctataaaagaaaaactagaaaat
ataaaatatattcaagaacaacaagtaatcctagtagaacagatacaaaaccttaaattt
aatcaagacaaacaaaaaactaagctctggcaacttcaaggagaagaacagcagagaaaa
acttggtctaaccaattagattggcaagaacaacaatataagaaactagtagaagacaaa
caaagattacaaaaggaaaaggatgaaattaatcaacaaatgtatcgtcttatgataatc
atcaatcaagaagataatattattaaaggtcaccagcaattatcagaattacaaaaagaa
gaaaaaagcttatctcttaagtttaaagtttatcaagaacaaactgaaagagaacaattg
ttaaccagcaagctaaataaaaaacatagtgtaattgagttgcaaattcatcaagctaaa
actcaattagatatattagaacaacaggaaaaagaactgcaggatattctaaagaattct
gatgaagtcaaaactactttacaacatctatataatcatcgtagacacttatctgaatta
gatagattacagtataaagttgcaccaattcaacaaagatactacggtttgcaatctgaa
attaaacaagttaaggctaatttaaaagccgagctagaacaactttatatctctgaaact
gattgtttgaaccaagtagataaaattgctaaaatacgggaatctgcactagaaatttat
actaagatacaaaatcttaataataaaaaagtttatcaaaaacgagtggaagaaaaaggt
caaaaacaaagggagtatcaagaaaggctcagggaaaatcagcggatttttaaagaaaaa
attgaagaattacaacaaaaactacaaaaactaaacctcccaaattcgacttgtcctcta
tgtgaacagccattaaatgaaactcatctgaatcatgtcatcagtaaaactaaattacag
gaacaagaaattaaagataaaattttgattttacaagaaaatatgtcccttgtagaaaaa
gaattaaaaacactgcgaggagaatttactcaattaaataaagacttagctgcttatcct
ttattacagaaaaagtttggacaattagaagcacaactagaaactattgaagcagtcaat
tttaaacttaaacaagttagagacaaaatcaaagaaattgaacaaaaattaaaccaaaat
agctatgctgtagatttacaatctgaacttaatattctgaatcaagaattaaaatatctc
aattatgacgagcaaacccatgttttagttagaggagaagtcgaacgattgcgtaaagca
gaagttaaacaagctaaattagaagatgcaaatcaccgtcagtcaattatttcacaacaa
aaacctcaacttattcaaaaaatatctgttcttaaacaagaaatcaaagacttgtatcaa
acttcaaagattaaacaagaaattgaggaaataaaacaatcaattcaaaatttaggctat
aacaatctggatcaccaaaaattactaaagtctcttcgtgagtcccagtcttgggaacta
aaactccaagaattgcaacaagcaaaacaacaatatccccagttacaaaaccggttagaa
attgtagaaatacgattgagcgataacctaactgaacaaaagaaaattaaacaagaaatt
gatatcttatcttttaagataaaatctacagtagatcaaagagaagtaattgctgttcta
gaaaaaagtattcagagccaacgacaaaaattagatgaattattagcaaatagaggaaga
ttagaacaatctatttctcaattagaaagccttaaacaacaatatactgatgataaaaaa
cagcttaaagatatctataggaaatatcgtgtttatacagaattagctaaagcgtttgga
aaaaacggcatccaagcactaatgattgaaaatattttacctcaattagaagctgaaact
aatcaaattcttactcgattaacggataatcaacttcatattcaattctttactcaaaga
caaggacgtagtggtagttctcgaaagaaaactacaaaaattattgagactttagatatt
ttaatttctgattttcaaggaactcgttcatatgaaacttattcgggcggggaagcattt
agaattaatttttctattcgtttagctttagcaaaattactagcacaacaggcaggaact
tctgtacaaatgctcattattgatgaaggatttggcacacaagatgctcaaggttgtgag
caattaattgctgcaattaatgctatcgcttcagacttttcttgtatttttagtgtcact
cacatgccgcgatttaaagaagcttttcaatgtcgtattgaagtatataaagacaatcaa
ggatctcaattagagttagttagttga
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