Cyanobacterium endosymbiont of Epithemia turgida: ETSB_1937
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Entry
ETSB_1937 CDS
T03622
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ceo
Cyanobacterium endosymbiont of Epithemia turgida
Brite
KEGG Orthology (KO) [BR:
ceo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ETSB_1937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ceo03019
]
ETSB_1937
03009 Ribosome biogenesis [BR:
ceo03009
]
ETSB_1937
03036 Chromosome and associated proteins [BR:
ceo03036
]
ETSB_1937
Enzymes [BR:
ceo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ETSB_1937
Messenger RNA biogenesis [BR:
ceo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ETSB_1937
Ribosome biogenesis [BR:
ceo03009
]
Eukaryotic type
90S particles
RNase
ETSB_1937
Prokaryotic type
rRNA processing factors
ETSB_1937
Chromosome and associated proteins [BR:
ceo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ETSB_1937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_MRPL44
DND1_DSRM
DRC7_C
PWWP_KDM3B
Motif
Other DBs
NCBI-ProteinID:
BAP18620
LinkDB
All DBs
Position
complement(2782230..2782925)
Genome browser
AA seq
231 aa
AA seq
DB search
MTTFLRFKHQALLDCALTHRSYVNEHCDVTEHNERLEFLGDAVLQFVVSEELYRRHPELS
EAQLTRLRSKLVDEPQLAQFAKILDLGKFMYLGQGAIKDGGQNNPALLSDTFEAIVGAYF
LDAGIEAVQKFVRSLFKDTIDTLIIPESKKVSSKIIDVKNRLQEWALASYRKVPEYFLIE
ELGPDHAKEFIFGVQINEQLLGTGKGRRKQEATKAAAQDALNRLPIFDELG
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgactacatttcttcggtttaaacatcaagcgttattagactgtgcgttaacccatcgc
tcttacgttaacgaacattgtgacgttacagaacataatgaacgtttagaatttttgggt
gatgcagtattacaatttgtcgtaagtgaagaactttatcgacgccatcctgaattaagc
gaggcacaattgactcgtttgcggtcaaaattagttgatgaaccccaattagctcaattt
gcaaagatcttagacttaggaaaatttatgtatcttggacaaggagcgattaaagatggg
ggacaaaacaatcctgctttattgagtgatacctttgaagctatagtaggggcatatttt
cttgatgcaggaatagaagcagtacaaaagtttgtgcgatcactctttaaagatacaatt
gatactctaataatccctgagtcaaaaaaagtttctagtaaaattatcgatgtcaagaat
cgtcttcaagaatgggcattagctagctacagaaaagttcctgaatactttttaattgag
gaattaggacctgatcatgcaaaagagtttattttcggtgtacaaattaatgagcaacta
ttagggacaggaaaaggtcgccgtaaacaggaagcgacaaaagccgccgcccaagatgct
ttaaatagattgccaattttcgatgagttaggataa
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