Crinalium epipsammum: Cri9333_0716
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Entry
Cri9333_0716 CDS
T02373
Name
(GenBank) WD40 repeat-containing protein
Organism
cep
Crinalium epipsammum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
nSTAND1
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
Beta-prop_TEP1_C
Beta-prop_Vps41
WDR90_beta-prop_4th
RMC1_N
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_WDR19_1st
eIF2A
Peptidase_C14
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
AAA_16
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
Beta-prop_DCAF12
PROPPIN
Beta-prop_ELP1_1st
NACHT
Beta-prop_IFT140_2nd
AAA_22
ATPase_2
Beta-prop_Nup120_160
Cytochrom_D1
NPHP3_N
RsgA_GTPase
DUF815
TniB
Motif
Other DBs
NCBI-ProteinID:
AFZ11646
UniProt:
K9VUM6
LinkDB
All DBs
Position
803223..807344
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AA seq
1373 aa
AA seq
DB search
MSELKRSLAVVIGINQYDVNNGVPALETAVHDAKELAFILEDKYKYQVLPLLDTDATQSR
LDSLLAAFTQKMLLLPDGSKVQIEPDDRVLFYFAGHGIALDGLDNTEGPAGYLVPQDAKL
DDSSTLLPMQQLHDALVQLPCRHLLIILDCCFAGTFRWAGLHRDAVRSQRMYRERYERFT
SGYAQQVITSAAYDEKALDSVYRFGQRGKIEGHSPFADLLLKALNGVADLTKDGVLTATE
LYVYLHSELGKLTSKQTPGLCQLKRHDKGEYIFVSPDFAEEKLQKAPLLDEKSNPYRGLE
SFDEAHQELFFGRQRVINELYAHLSKREKPPLTVVLGASGTGKSSLVKAGLLPRLREKQW
QIIEPSRPGKSPFAALAKAVLHATNASARDDLNCINMLSEKLQQAPQTFTEMVSLGNNSE
QKLILVIDQFEELITMCQPEEQQQFLSWLKALLANHSRRLNVVITLRSDFEPQFSSVLLE
RSDWMAARFVVPLMTQDDLREVIEKPAAEKAMYFEPPKLVERLINDVVQMPGALPLLSFT
LRELYLKYLQRRGNNRAMTQEDYEDLGGVMGSLTKRATEEYEKLAKFDPANEQSVRRVML
RMVSVEGGESARRRVPKSELVYRHAKENQRVQQVIQAFSEARLIVEGTNSQGEPYIEPAH
DALVRGWDKLQQWRTQEQANLLLQRELTSDANKWATNKKQAVGILWDDDPRLPLVEQVSD
LDNGWLNFLELEFVEHSRLKRRKNRVGLSIAATGVIVFLMGFAFIQYIQNLDAQIRASSA
SAQAFSSSGQEFEALLESLKAAKTLKQLKWLRGASTDTQIQTIISLQKAVNGVRERNRLE
GHTYSVNGASFSQDGKTIASASDDSTVKLWNLDGTLRKNLQQPGSRFNSVSFSPQGKVVA
SADWDKTVKLWSIDGTLLKTLKGHRYGVNSVSFSPDGKAIASASWDKTIKFWSLDGKELK
TLKGHSDEVISVSFSSDGKTIASASQDKTVKLWNLDGKELKTLKGHSDGVNSVSFSSDGK
TLTSASTDNTVKIWSLNGRKPTMFQDSSVQITTVSFSPDGQTIALVRDDGLVKLRHLQGR
LLRPLEEYDDIIISVGFSPDGKTIASAENSIELSSDGRTIPSTKVKLRSINGTLLKTFKG
HTNLVASVTFSPDGKLLASASNDKTVKLWNLDGKELATFRGHTNNVNSASFSSDSKLIAS
ASKDNTIKVWLLNGKELKTFKGHTDRINSVSFSPDGKLLASASNDSTVRLWRFSSREPII
LRGHSGWVKDVTFSPDGKVIASAGADNTVKLWSLNGRELKTLQGHSSTVLGVKFTFDGKT
LISVSGDGTVIMWNLDLGDLQVQGCNWVHDYLKNNSNVSKSDRHLCNGIYTIN
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgagttgaaacgcagtctagcagtggttatcgggatcaatcaatatgatgtcaat
aatggcgttccagcgcttgagacggctgtccatgacgcgaaggaacttgccttcattttg
gaggataaatacaaataccaagttctgccactgcttgatacggatgcaactcagtctcgg
ctcgatagtttgttggcagcttttacacagaagatgctgcttttaccagatgggagtaag
gtgcaaattgaaccggatgatcgcgttttgttctattttgcaggacatggcatcgctctc
gatggacttgacaatacagaaggcccagcaggctaccttgtaccccaagatgcgaaactt
gatgatagcagtaccttgttgccgatgcagcaattgcacgatgctctcgttcaacttcct
tgccgtcatctgttgattatcctcgattgttgctttgcaggaacctttcgctgggcagga
cttcatagagatgcggtgcgctcgcagagaatgtatcgagaacgctatgagcgctttacc
tctggttacgcccagcaggttatcacctctgctgcttatgacgagaaagcattagattcc
gtttaccgttttggacaacgaggtaaaatagagggtcattccccttttgctgaccttctg
ctcaaggcactaaatggagtagcagatttaacgaaagacggtgtactcactgccactgaa
ctttatgtctatctccacagcgagttaggaaagctaacctccaaacaaaccccaggattg
tgccaacttaagcggcacgataagggagagtacattttcgtcagtcccgattttgcagaa
gagaaattacaaaaagcacctctactggatgaaaaaagtaacccttaccgaggtttagag
tcgtttgatgaagcacaccaagagctattctttggtagacaacgagtaattaacgagcta
tacgcccacttgtctaaacgggaaaagccaccactgacagttgttttgggggcttcaggt
acaggcaagtcgagtttagttaaagctggtttgcttccccgcttgcgcgaaaagcagtgg
caaattatcgaaccctcgcgccctggaaagtctccctttgcagcccttgccaaagcagtc
ttgcacgctaccaacgcaagcgctagagatgatttgaactgcatcaatatgctgagtgag
aagctacaacaagcaccgcaaaccttcactgagatggtgagcttgggaaacaactccgag
caaaagttgattttggtaattgaccagtttgaagaactaattactatgtgtcagcctgag
gagcagcagcagttcctgagctggctcaaagcattattggctaatcattcaagaaggtta
aacgttgtcattactctacgttctgattttgagcctcagttttcgagtgtgcttttggag
cgcagtgattggatggcagcgcggtttgtcgtgccactgatgacgcaggatgatttgcgg
gaggtcattgagaagccagccgcagaaaaagcgatgtattttgagcctcccaagctagta
gagcggctgattaatgatgtggtgcaaatgccgggagcgctgccactactttcttttacc
ctacgcgagctttaccttaagtatttgcagcgtcggggtaataatcgagcaatgacccag
gaggactacgaggatttgggtggggttatgggttctcttactaagagagccactgaagag
tatgagaagttggccaagtttgacccagctaatgaacaaagcgtgcgtcgggtgatgctg
cggatggtttcagtagagggaggagagtcagcacggcgacgggtacctaaatctgaattg
gtgtaccgacacgcaaaagagaatcagcgggtgcaacaggtaatacaagctttttctgaa
gcccgtttaatcgtggaaggaacaaactctcagggcgaaccttatatagagccagcgcat
gatgcattagttcgggggtgggataagctacagcagtggagaactcaggaacaagcaaat
ctacttctacagcgcgagctgacgtctgacgctaacaagtgggcaacgaataaaaagcaa
gctgttggtattctctgggatgatgatccccgcctgcctctagtagagcaagtatctgat
ttagataacggctggctgaattttctagagttggagtttgttgagcacagccgcctgaaa
agacgaaaaaaccgcgtcgggttaagtattgctgctacaggagtaatagtgtttctaatg
ggatttgcctttattcagtacattcagaatttagatgcccaaattagagcatcgagtgcc
tctgcacaagcgttttcttcgtccgggcaggagttcgaggcactattagaaagtttgaag
gcagcaaaaaccctaaaacaactaaagtggttgagaggggctagtactgatacccaaatt
caaactatcatatcgcttcagaaggcagttaacggggttagggagcgcaaccgtttagag
ggacacacttatagtgttaacggggcgagtttcagccaagatggtaagaccatcgcctca
gctagtgatgactccacagtgaaactctggaaccttgatggcactttacgcaagaatctt
caacaacctggtagtcggttcaatagtgtaagtttctcaccccaaggtaaggtagttgcc
tcagccgattgggataagacggtcaaactttggagcattgatggcactctcctcaaaaca
ttgaaaggtcaccgttatggagtcaacagtgtgagtttcagtcccgatggcaaagccatt
gcctcggctagctgggataaaacaatcaaattttggagcttggatggaaaagaacttaaa
actctcaaaggtcacagcgatgaagtcataagcgtgagctttagttccgacggcaaaacc
attgcctcggctagtcaggataagacggtcaaactctggaaccttgatggaaaagaactt
aaaaccctcaaaggtcacagcgatggagtcaacagtgtgagctttagttccgatggcaaa
acccttacctcggctagtactgataacacagtaaaaatctggagccttaatggtaggaaa
cctacaatgtttcaggactctagtgttcagattactactgtaagtttcagcccagacggt
caaaccattgccttggttagagatgatggcttagtaaagctcaggcatcttcaaggtaga
ttgctcagacctcttgaggagtacgacgacattattatcagtgtaggttttagcccagat
ggtaagacaattgccagtgctgaaaactccattgaactgagttcggatggcaggactatt
ccgagtaccaaggttaaacttcggagcatcaatggcacattacttaaaaccttcaaaggt
cataccaatttagtcgctagtgtaactttcagtccggacggtaagttgctagcttctgcc
agtaatgacaaaactgttaaactctggaaccttgatggcaaagaactcgcaacttttcga
ggacataccaataacgtcaatagtgccagttttagctcggacagtaagttaatcgcttct
gcaagcaaagacaacacaattaaagtttggctcctcaacggaaaggaactcaaaactttc
aaaggtcatacagatcggatcaacagtgtgagtttcagcccggatggtaaattactagct
tctgctagtaatgactctacagtaagactttggcgcttcagtagcagagagcctataatt
ttgaggggtcatagcggctgggttaaggacgtaactttcagcccagatggcaaagtcatt
gcctcagctggtgcagataacacagttaagctttggagccttaacggtagagaactcaaa
accctccaaggacatagtagcactgtcttaggcgtgaaattcacctttgatggcaagacc
ctaatctctgttagtggggatggtacagtaattatgtggaatttagatttaggcgatcta
caagtccagggctgtaattgggtacatgattacttaaaaaataattctaacgttagtaag
agcgatcgccatctttgtaatggcatatatacaattaattag
DBGET
integrated database retrieval system