Crinalium epipsammum: Cri9333_1444
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Entry
Cri9333_1444 CDS
T02373
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cep
Crinalium epipsammum
Brite
KEGG Orthology (KO) [BR:
cep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cep03032
]
Cri9333_1444
03400 DNA repair and recombination proteins [BR:
cep03400
]
Cri9333_1444
Enzymes [BR:
cep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Cri9333_1444
DNA replication proteins [BR:
cep03032
]
Prokaryotic type
DNA Topoisomerases
Cri9333_1444
DNA repair and recombination proteins [BR:
cep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cri9333_1444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
DNA_ligase_ZBD
Zn_ribbon_recom
Zn_ribbon_Top1
Zn_ribbon_ISL3
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
AFZ12338
UniProt:
K9VW55
LinkDB
All DBs
Position
complement(1631654..1633846)
Genome browser
AA seq
730 aa
AA seq
DB search
MTKLLLIESPGKLKKLSQILGSGWIVKASMGHIRELANDGEDALGFDLDGEQVRCRYEAR
NERARKVITELKQAVKQVSEVYIATDPDREGETIGWHLAQELRLKQPKRVTYAEITKPAV
TTAIAHPKILDQNLIAAGRARDCLDKLVGYKGSKHLVWALNNGAKSMGRVQSATLHLLAQ
RETEIITFVPQDYWSVWVEYAEGFKAFYRRSLQGQTKEKAEEADDAGSEIKTAESDRVKS
QEEADRLVAIAQTNPHHIIKVENKTTSQSPPAAFITSTLQQAAGAKLRFSPEATMKVAQS
LYEAGYITYMRTDSVVLSDQFCADVRGYLQQHDPENVPTKLAKHRAAKNAQEAHEAIRPT
DVNLIPERLRNQASSDQAQLYELIWNRAVASQCAAAKLAKTRIITQSDSVYWEARGQVLV
FPGYTRYWNNISDDSQLPKVKEGQPLTLKQARADKKQTQPPPRYTEPKLVQLMERKGIGR
PSTYSPTIKTLKEREYVQLTKGKLQPTQLGMELDAFLDQVLPDLIKAEFTAQMELKLDAI
ASGSLNWESYLTSWNQEYFTPALTKAISEIKNFKQTSPPTNKSTAKSKTSKSINIQCPKC
GQQMTKVASKSQKMQSDHFLSCDKRNSGCGCVMFLNVKSGSYELPYSERKVAPKTESLTE
YTCPVCSASLERYEYSKNGQNKTMLRCSNSKNRQAKCKEVAFFESKTGNWWSPKFGEMKP
IKAEKKTKRG
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacttttattaatcgaatcccctggaaaactcaaaaagttaagccaaattttg
ggatctggttggattgttaaagctagcatgggacatatccgagagttagcaaatgatggg
gaagatgctttagggtttgatttagatggggaacaagtgcgctgtcgttatgaagcaaga
aatgaacgcgctaggaaagttatcacagaattgaaacaagctgttaagcaagtaagtgaa
gtttacattgcgactgaccctgatagagaaggggagacaattggttggcatttagcgcaa
gaattaagattaaaacaacctaagcgtgttacttatgctgaaattactaaacctgctgtc
actacagcaattgctcatcctaaaattctagaccaaaatttaatcgccgcaggtcgtgct
agggattgcttagataagttagttggttataagggaagtaagcatttagtttgggcgctg
aataatggtgcaaaatcaatgggacgggtgcaaagtgcgactttgcatctattagcgcag
cgagaaacggaaattattacgtttgttccccaggattattggtcagtgtgggtagaatat
gcagaaggtttcaaagctttctatcgtcgcagtttgcagggacagactaaggaaaaggcg
gaggaagctgatgatgcgggtagtgaaattaagactgcggaatcagatagggtgaaatct
caagaggaagctgatagattagttgcgatcgcacaaaccaatcctcaccatataattaaa
gtagaaaataaaaccacttctcaatctccacctgctgcttttattacctcgacattgcaa
caagctgctggtgcaaagttgcgctttagtccagaagcaactatgaaagttgctcaatct
ttatacgaagcaggttatataacttatatgcggacagattcagttgtactgtccgatcaa
ttttgtgctgatgtgcgcgggtatttgcaacaacacgaccctgagaatgtaccaactaag
ttagcaaaacatcgtgcagctaaaaatgctcaagaagcacatgaggcgatacgccctaca
gatgttaatttaattcctgaacggttgcgaaatcaagcaagtagcgatcaagctcaactt
tatgaactaatttggaatcgcgctgttgcttctcaatgtgcggcggctaaattggcaaaa
actcgcattattactcagtcagattcagtttattgggaagcgcggggacaagttttagta
tttccaggctatacaaggtattggaataatatcagcgacgattcgcaactgcctaaagtt
aaggaaggacaaccgcttactcttaaacaagcgcgtgcggataaaaagcaaactcaacca
cccccacgttatacagaaccaaagttagtacaattaatggaacgtaaggggataggaaga
cctagtacttattctccgacaattaagactttgaaggagcgtgagtatgtgcaactaact
aagggaaagttgcaaccaacgcaactggggatggagttagatgcttttttagatcaagtt
ttacccgatctaattaaggctgagtttacagcgcaaatggagttaaaattggatgcgatc
gcatctggttctctaaactgggaatcttatttaaccagttggaatcaggaatattttaca
ccagcattaactaaagcgattagtgagattaaaaattttaaacaaaccagtccgccaact
aataaaagtaccgctaaaagcaaaacatcaaaatcaatcaatattcaatgtcccaaatgc
ggacagcaaatgaccaaagttgcttctaagtctcagaagatgcaatcagaccattttttg
agttgcgacaagcgtaattctgggtgtgggtgcgtaatgtttttaaatgtgaaaagcgga
agttatgagttaccttattctgagcggaaagttgcgcctaaaacagaatcgttgaccgag
tatacttgtcctgtttgcagcgcatctttagagcgttacgagtatagcaagaatggacag
aataaaactatgctgcgttgttctaattctaaaaatcggcaagctaaatgtaaagaagta
gcattttttgagagtaagacgggtaactggtggtcgcctaagtttggggagatgaagccg
attaaagcagagaaaaagactaaacgcggatag
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