Crinalium epipsammum: Cri9333_2246
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Entry
Cri9333_2246 CDS
T02373
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
cep
Crinalium epipsammum
Brite
KEGG Orthology (KO) [BR:
cep00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Cri9333_2246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cep03021
]
Cri9333_2246
Transcription machinery [BR:
cep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cri9333_2246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
PatG_D
Sigma70_r4_2
Lipin_mid
Motif
Other DBs
NCBI-ProteinID:
AFZ13116
UniProt:
K9VYT8
LinkDB
All DBs
Position
complement(2554296..2555417)
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AA seq
373 aa
AA seq
DB search
MNITELDQTDSLLSAASEDVLIADVPDLELAELELVEIEFSDRSDELNNGGAKYQKNLSE
DTVGAFFKEMARYPLLKAEEEVDLANQVQFILQIEEIEERLEAQLNHKPSKAEIAESLGM
NEKQLDHRLYQSRVAKRKMIRSNLRLVVSIAKRYLNRGVAFLDLIQEGALGLNRAAEKFD
PDKGYKFSTYAYWWIRQAITRTIANDSRTIRLPIHIVEKLNKLKKAQRNLKQELHRNPTE
VELAEALEIPPEHLRQLLQLRRRSLSLNHRVGKGEETELVELLEDSENQSPEQQMNDSMM
RQDIWEVLDEVLNERERDVICLRYGLASNEPYTLEEVGSLFNLSRERVRQIQSKAMRKLR
RPQVARRLKGWLT
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaatattactgaattagatcaaactgattctttgctatccgccgcaagcgaagatgtt
ttaattgccgatgttcctgatctagaactagcagaattagaactggttgaaatcgaattt
tcagatagatccgatgaactaaataatggtggagctaaatatcaaaaaaatctttctgaa
gatacagtaggtgctttcttcaaagaaatggcacgttaccctcttttaaaagctgaagaa
gaagttgatttagccaatcaagtacaatttatattacaaatagaggaaattgaggaacgc
ctagaagctcaactgaaccacaaacctagtaaagcagaaatagctgaatcgctggggatg
aatgagaaacaactcgatcatcgtttatatcaaagccgcgttgctaaacgcaagatgatt
cgctcaaacttgcgcttagttgtttctattgctaaacgttatttaaatcgaggcgtagct
tttctggatttaattcaagaaggcgcgttgggattaaaccgcgctgctgaaaagtttgat
ccagataaaggttataaattttctacatacgcatattggtggattcgtcaagcaattaca
cgcactattgctaatgattcgcggactattcgcttaccgattcatattgttgagaagcta
aataaacttaaaaaagctcaacgcaatcttaagcaagaattacacagaaatcctacagaa
gtagaactagcggaagctttagagataccaccagaacatttacgccagcttttgcagtta
agaaggcgatcgctttctttaaatcatcgcgttggtaagggagaagaaacagaattggta
gagctattagaagatagtgaaaaccaatctcccgaacagcaaatgaacgactcgatgatg
cgtcaagatatttgggaagtactggatgaagtattaaatgaaagagaaagagatgtaata
tgtttgcgttatggtttggctagtaacgaaccttacactttagaagaagtaggtagtttg
tttaacctctctcgcgaacgagtgcgtcaaatccaaagtaaagctatgcggaaattgcgc
cgtcctcaagtagcaagacgcttaaaaggttggttaacttaa
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