Crinalium epipsammum: Cri9333_2682
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Entry
Cri9333_2682 CDS
T02373
Name
(GenBank) DNA-directed RNA polymerase gamma chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cep
Crinalium epipsammum
Pathway
cep03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cri9333_2682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cep03021
]
Cri9333_2682
03400 DNA repair and recombination proteins [BR:
cep03400
]
Cri9333_2682
Enzymes [BR:
cep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cri9333_2682
Transcription machinery [BR:
cep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cri9333_2682
DNA repair and recombination proteins [BR:
cep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cri9333_2682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
AFZ13538
UniProt:
K9VZL0
LinkDB
All DBs
Position
complement(3005962..3007839)
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AA seq
625 aa
AA seq
DB search
MRHQLEQRFDYVKIGIASPDRITQWGQRALPNGQVVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVSHVWYLKG
IPSYLSILMDMPLRDVEQIVYFNAYVVLNPGNAENLTYKQLLTEDQWLEIEEQLYSEDTQ
LVGVEVGIGAEALQRLLQDVDLETEAEKLREEISNSKGQKRAKLIKRLRVIDNFIATGSK
PDWMILTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLKIHQCGLPREMAIELFQPFVIHRLIRQGLVNNIKAAKKLIQRADPSVWDVLE
EVIAGHPVLLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LESQAEARLLMLACHNILSPATGRPIVAPSQDMVLGCYYLTADNPAAQGGGDRYFANLDD
VICAYKQNQLDLHAYIWVRYDGSVAAEEPDNEPVSVETSSDGTVTKHYKFRRVRELADGT
LIRQYIRTTAGRIIYNKTVQESLIG
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagacatcaacttgagcagcgttttgattatgtcaagattggaatagcttctccagat
cgaattactcaatggggacagagggcgctgcctaatggtcaagttgttggtgaagttacc
aagccagaaacaataaattatcgcaccctcaaaccagagatggatggcttattttgtgag
cgcatctttggacctgctaaagattgggagtgtcattgtggtaagtataagcgggtgcgc
catagagggattgtttgtgaacgctgtggtgtagaagtcacagaatcccgcgtgcgccgt
caccggatgggatatattaaactggctgcgcctgtatcccacgtttggtatttaaagggc
attcctagctatctcagcattctgatggatatgcctctacgtgatgtagagcagatagtt
tactttaatgcctatgttgttttaaatcctggtaatgctgaaaatctgacttacaaacaa
ttactgacagaagatcagtggttggaaattgaagaacagctttatagcgaggatactcaa
cttgttggtgttgaggtaggaattggtgctgaagcactgcaaagactgttgcaagatgtc
gatttagaaacagaagcagaaaagctgcgggaagaaatcagcaactccaaagggcaaaag
cgtgccaagttgattaaacgcctacgggtgattgacaactttattgctactggtagtaaa
cctgactggatgatcttgacggtaattccggtgattcctccagatttacgcccgatggtg
cagctagatggtggacgttttgctacgtctgacttgaatgatttgtatcgacgggtaatt
aaccgcaataacaggttggcaagattacaagaaattcttgcgccagaaattattgtgcgt
aatgaaaagcggatgctacaggaagctgtggatgcgctgatcgataatggtcgtcggggt
cggacggtggttggtgcaaataaccgacctcttaagtcgctgtcagacattattgaaggt
aaacaaggtcgtttccgccaaaaccttttgggtaaacgggttgattactctggacgaagt
gtaattgttgttggtcctaagctgaaaattcatcagtgcggtttgccacgagaaatggct
attgagctatttcagccgtttgtgattcaccgcttaattcgtcaagggttggtgaataac
attaaagccgctaaaaaattgattcagcgtgccgatcctagtgtgtgggatgtgttagag
gaagtgatcgctggtcatccagtgttacttaaccgcgctccaacacttcaccgcttaggt
attcaagcatttgagccaattttagttgaaggtcgagcaattcaattgcatccgttagta
tgtccggcgtttaacgcggattttgatggtgaccaaatggcggttcacgttcctttgtct
ttggaatcccaggcagaggcaagattgttaatgttagcttgtcataacattctgtcacca
gcaacaggtcgcccgattgtggctcctagtcaagatatggtgttgggttgttactatctg
accgcagacaatcctgctgctcaaggagggggcgatcgctacttcgctaacttagatgac
gtaatctgcgcttataagcaaaatcagctagatttacacgcctacatctgggtgcggtat
gacggcagcgtagctgctgaggaaccggataacgaacctgtttctgtagaaacttcgtca
gatggcacagtaaccaaacattataaatttcgccgtgtccgtgagttagctgacggtacg
ttgattcgtcagtacatccgcaccacagcaggtcgaattatctacaacaaaacggttcaa
gaatcactaattgggtaa
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