Crinalium epipsammum: Cri9333_3219
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Entry
Cri9333_3219 CDS
T02373
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cep
Crinalium epipsammum
Pathway
cep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cri9333_3219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cep03400
]
Cri9333_3219
DNA repair and recombination proteins [BR:
cep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cri9333_3219
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Cri9333_3219
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
AAA_23
AAA_21
DnaJ_CXXCXGXG
nSTAND3
AAA_22
Viral_helicase1
NACHT
cobW
MeaB
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
AFZ14052
UniProt:
K9W2T5
LinkDB
All DBs
Position
3614041..3617088
Genome browser
AA seq
1015 aa
AA seq
DB search
MPHPADISNLTTSPNGHHPSNKDENTIRIRGARQHNLKNIDLELPRDRLIVFTGVSGSGK
SSLAFDTIFAEGQRRYVESLSAYARQFLGQLNKPDVDAIEGLSPAISIDQKSTSHNPRST
VGTVTEIYDYLRLLFGRAGVPHCPICDRSIVPQTIDEMCDRIMELPDRTRFQVLAPVVRG
KKGTHAKLLSSLASEGFVRVRVDGVVYELSENIELDKNYTHTIEIVVDRLVKKPGIQERL
TDSLTTCLRHANGIAVIDVIPDTSVQTDSSPNTRRYSENSTDFLKYQESSENKVTDNNQA
TPTNNDNDYQEITKEIVFSENFACPEHGAVMDELSPRLFSFNSPYGACPSCHGLGNLRTI
SPDLIVPDPEASVYSAIVPWAEKDNSYYLGLLYSVGQAYHFELQTIWKNLTAEQQHVILH
GADKPIWMQERNDHRRYAGAIAILKRQYDDGSELQKQKLEQYLVDQPCEVCQGKRLKPEA
LSVRLGQHRILDLTSVSIGECRQRIDELKLSDRQAQIADLVLREIKARLQFLLDVGLDYL
TLDRPAMTLSGGEAQRIRLATQIGAGLTGVLYVLDEPSIGLHQRDNGRLLNTLTKLRNLG
NTLIVVEHDEETIRAADHLVDIGPGAGIHGGRIISQGNLDTLLQAEDSLTGAYLSGRKVI
NTPAERRDGNKRSLVIKNAYRNNLKNVDVEIPLGKLVSVTGVSGSGKSTLINELLYPALQ
HNLTRKVPFPKDLEKIDGLNAIDKVIVIDQSPIGRTPRSNPVTYTGIFDPIREVFCQTIE
AKARGYKPGQFSFNVKGGRCEACSGQGVNVIEMNFLPDVYVQCEICKGDRYNRETLQVKY
KNKSIADVLNMTVEEALEFFINIPRAASKLQTLADVGLGYIRLGQTAPTLSGGEAQRVKL
ATELSRRATGKTLYLIDEPTTGLSFYDVHKLLDVLQRLVDKGNSILVIEHNLDVIRCADW
VIDLGPEGGDKGGEIIAVGTPEEVAKNNRSYTGQYLKQVLQQHPPTLVHNSDLKQ
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatcctgccgacatctccaacctcacaacctccccaaacggacatcaccccagc
aacaaagatgaaaacactatccgcattcggggtgcgagacagcataatttaaagaatata
gatctagaactaccacgcgatcgcttaattgtcttcacaggcgtatccggttctggtaaa
tcttccctggcttttgataccatctttgcagaaggacaacgccgctacgttgaatctctc
agcgcctacgcgcgacaatttttaggacaactaaataaaccagatgtcgatgcgatcgaa
ggtttaagtcccgctatctccatagatcaaaaatccacgtcccacaacccccgctctaca
gttgggactgttaccgagatttacgattatctgcgcctactatttggacgcgctggtgta
cctcattgcccaatatgcgatcgctctatcgtaccccaaactatagatgaaatgtgcgat
cgcattatggaacttcccgaccgcacccgctttcaagttttagcccctgtagtacgtggt
aaaaaaggaactcacgcaaaactcctatctagccttgcttctgaaggattcgtccgcgtg
cgcgtcgatggtgtagtatacgaattatccgaaaatatcgagctagataaaaactatacc
cacactattgagatcgttgttgaccgcttagttaaaaagcctggtatacaagagcgttta
accgattctctcacaacttgcttgcgtcatgctaatggaattgcggtgattgatgtcata
cccgatacatctgtacagacagactcctcacccaatacacgacggtattctgaaaatagc
acagattttctaaaatatcaagaaagtagcgaaaataaggttacagacaataatcaagca
acccctacaaataacgataacgactatcaggaaattaccaaagaaatagtattttcagaa
aactttgcttgtcccgaacatggggcggtaatggatgaactttcgccaagattattttct
tttaactccccttatggcgcttgtccgagttgtcacgggttgggtaatttgcggacgata
tcaccagatttgatagtacccgatccagaagcgtcagtatatagtgcgatcgtgccttgg
gcagaaaaagataattcctattatttgggactactttatagtgttggacaagcttatcac
tttgaattgcaaactatttggaagaatctaaccgccgaacagcagcacgttattttgcat
ggtgctgataaacctatttggatgcaagagcgcaacgatcatagacgttatgctggtgcg
atcgcaatcctcaaacgtcaatatgatgatggttcggaattgcaaaaacaaaaattagag
cagtatttagtcgatcaaccttgcgaagtttgtcaaggcaaaagattaaaaccagaagcc
ttatctgtacggttgggacaacatcggatattagatttaaccagtgtttcaattggggaa
tgtcggcaacggatagatgaattaaaattgagcgatcgccaagcgcaaattgctgactta
gtactgcgagaaattaaagctagattgcaatttttgttagatgttgggttagattacctg
acattagatcgtcccgcaatgaccctttctggtggagaagcgcaacggattagattagct
acacaaattggtgcaggtttaacaggtgtactctatgtattagatgaaccaagtatcgga
ttgcatcaacgagataatgggcgattattgaatactttaactaaattgcgtaacttagga
aataccttaattgttgtcgagcatgatgaagaaacaattcgcgctgcggatcatttagtt
gatattggtccaggtgcaggtattcatggcggaagaattatttctcaaggaaacttagat
acattattgcaagcagaagactctttaactggtgcttatttatcaggaagaaaagttatt
aatacgccagcagagaggcgcgacggaaataagcgatcgctcgttattaaaaatgcctac
cgcaacaaccttaaaaatgtcgatgtagaaattccactaggtaaacttgtttcagtcaca
ggggtatctggttccggtaaatctaccttaattaacgaattactttatccagcattacaa
cacaatcttacccgtaaagtaccatttcccaaagacttagaaaaaatagacggactcaac
gccattgataaagtaattgtaatcgatcaatcaccaattggtcgcacacctagatctaat
cctgttacttacacaggcatttttgatccaattcgggaagtattttgccaaactatcgaa
gctaaagcaagaggttataaaccagggcaattttcttttaatgttaaagggggaagatgc
gaagcttgtagcggtcaaggagtgaatgtgattgagatgaacttcttaccagatgtgtat
gtgcagtgtgaaatttgtaaaggcgatcgctacaatcgtgaaaccttacaagttaagtac
aaaaacaaatccattgccgacgtacttaacatgacagtagaagaagccttagagtttttt
attaatattccccgcgctgcaagtaagttgcaaaccttagccgatgttggtttaggatat
atccgtttaggacaaacagcacctactttatctggtggagaagcgcagcgcgtcaaatta
gccacagaattatcccgtcgcgccacagggaaaaccttatatttaatagatgaaccaaca
acaggtttatctttttatgatgtccacaaattactagatgtcttgcaacggttagtagat
aaaggcaattcaattttagtaattgagcataatttagatgtaattcgttgcgccgactgg
gtaatagatttaggtccagaaggcggggataaaggcggagaaattattgcagtgggaaca
cctgaagaagtagcgaagaataataggtcttatacggggcaatatttaaagcaagtattg
cagcaacatccacctacactcgttcataattctgacctaaaacaataa
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