Crinalium epipsammum: Cri9333_3441
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Entry
Cri9333_3441 CDS
T02373
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
cep
Crinalium epipsammum
Brite
KEGG Orthology (KO) [BR:
cep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cep03021
]
Cri9333_3441
Transcription machinery [BR:
cep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cri9333_3441
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_r4
HTH_23
HTH_24
HTH_10
HTH_38
Sigma70_ECF
HTH_3
LacI
HTH_8
HTH_Crp_2
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AFZ14266
UniProt:
K9W225
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All DBs
Position
complement(3852747..3853532)
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AA seq
261 aa
AA seq
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MATQSPSRSNSINLLIAYHQNPSVALRNRLVLMNAGLVRQIAHRISYQCAEPYQDLEQIG
YFGLIRAIERFNPNQGCAFSSFAVPYIRGEILHFLRDKGSVVKIPRRWQELQKEGQKVRH
ELFCTLGRAPRDAEIAEALNVSVQEWRESKSAAQNRLPLSLDATIGQTMDYPVTLGETLP
DPHDQAMRHFEEDRHQLEGALSHLEEKTQAAIEYVFLRELPRKEAAKRIGVSPMTVTRHL
QRGVEQLVTILQAPNAERLAS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcaatccccttcccgctcaaactcaataaatcttttgattgcttaccaccaa
aatccttcagttgcccttcgcaatcgactggtgttgatgaatgctgggctggtgcgccaa
attgctcatcgaattagctatcagtgtgcggaaccttatcaagatttagaacaaattggt
tattttggtttaattagagcgatagagcggtttaatcccaatcaaggctgcgcttttagt
tcttttgccgtaccttatattcgtggcgagattctgcattttctacgtgataaaggaagt
gtagttaaaattcctcgtcgttggcaagaactgcaaaaagaaggtcaaaaagtccgtcac
gagttattttgtactttaggtagagcgcctagagatgctgaaattgctgaagcactgaat
gtctctgttcaagaatggcgtgaaagtaagtctgcggctcaaaatcgtttacctttaagt
ttggatgctacgattggtcagacaatggattatccagtgactttaggagaaacactgccc
gatccccacgaccaagctatgcggcattttgaagaagatagacatcagttagaaggtgct
ttaagccacttagaagaaaaaactcaagcagcaattgagtatgtgtttttgcgcgagtta
cctcgtaaggaagcagcaaagcgaattggagtaagtccaatgacagtaacgcgccatctg
caaaggggcgttgagcagttagtaaccattttgcaagctccaaatgcagaacgtttggct
agctaa
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