Crinalium epipsammum: Cri9333_3471
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Entry
Cri9333_3471 CDS
T02373
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cep
Crinalium epipsammum
Brite
KEGG Orthology (KO) [BR:
cep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cep03016
]
Cri9333_3471
Enzymes [BR:
cep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Cri9333_3471
Transfer RNA biogenesis [BR:
cep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Cri9333_3471
Prokaryotic type
Cri9333_3471
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AFZ14296
UniProt:
K9W254
LinkDB
All DBs
Position
complement(3884042..3884998)
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AA seq
318 aa
AA seq
DB search
MQGFLNLNKPAGFTSHDCVARVRKLLRLKRVGHGGTLDPAVTGVLPIALGKATRLLQYLR
QDKAYQGTIKLGVTTTTDDLAGEIISQQPVNDLSLEAVTAALQQFEGTIQQIPPNYSAIQ
VQGKRLYDLARAGEKIDVPARTVEVYQIDVLDWRGGEFPEIDVAIACGSGTYIRAIARDL
GIALNTGGVLASLIRTASCGFNLADSITFEELEEQIQRGTFQPIPPPIALTHLISVNLSA
TDAKRWCQGQKILNPQFSILDITESEEQEPSDRISIQAAKSTNFLRVYDENQQFLGIANL
TDSDQGKVLTPQMVFEAL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaggtttcttaaatttaaacaaaccagcaggttttacttcccatgactgtgtagcg
cgggtgcgtaagttactgcgtttaaagcgtgtcggacatgggggaactttagatcctgct
gttacgggtgtattaccgattgccttgggtaaagctacgagattattacaatatctccgc
caagataaagcttatcaagggacaattaagttaggagtaacaacaacaactgatgattta
gctggggaaattatttctcaacaaccagtaaatgatctgagtttagaagctgttacagca
gcactacaacaatttgaaggaactattcaacaaatcccacctaattacagtgctattcaa
gtacaaggtaaacgtttatatgatttagcgcgggctggagaaaaaattgatgtgccagcg
cgaacagtggaagtatatcagattgatgttttagactggcgaggtggggagtttccagaa
atagatgtagcgatcgcctgtggatctggtacatatataagagcgatcgcacgtgattta
ggtattgctcttaatactggtggcgtactcgcttccttaatacgcaccgccagttgtggg
tttaatttagctgatagtatcacttttgaagaattagaagaacagattcagcgaggtaca
tttcaaccaatcccaccgccaatcgctttaacacatttaatatctgtaaatttatccgca
acagatgctaaacgttggtgtcaagggcaaaaaattttaaatcctcaattttctatttta
gacataacagaaagtgaagaacaagagcctagcgatagaatatcaattcaagcggcaaaa
tcaacaaactttctacgggtttatgatgaaaaccagcaatttttaggcattgctaactta
actgattcagatcaaggaaaagtgttaacgccacagatggtttttgaggcactttag
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