Crinalium epipsammum: Cri9333_3668
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Entry
Cri9333_3668 CDS
T02373
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cep
Crinalium epipsammum
Brite
KEGG Orthology (KO) [BR:
cep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cep03400
]
Cri9333_3668
DNA repair and recombination proteins [BR:
cep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cri9333_3668
Archaeal homologous recombinant proteins
Cri9333_3668
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AFZ14481
UniProt:
K9W2N0
LinkDB
All DBs
Position
complement(4109920..4112964)
Genome browser
AA seq
1014 aa
AA seq
DB search
MIPIQLTLKNFFSYREASLDFRGLHTACICGANGAGKSSLLEAITWAIWGESRAATEDDV
INAGALEVRVDFVFQYNQQTYRVIRTRQKGGSGSLEFQIETSNNNFRSLTEKGVRATQQL
ITGHLKLDYDTFINSAYLRQGRADEFMLRRPNERKQILADLLKLDQYEVLAEQAKDSSRQ
FKAKAEQLDLSLQSIQTQLQQKEAIALQQSEIETQLQQLQQVQEIDRQQLQQLQSLQHQR
QTWQQQLTWQRQQYQNLTQDCDRLQQDIATNQRQQQQLESLIAQESQITTGYTEYLNLQA
TEEALAGKFQAYQDAQQQKQQLQQQLTEKINEINLQIRQKQAKLEALSQQEAEIQETLNK
SAEITTALEQLQRSRTRLAQLDKLQLNVSPLLQRRANLQTEINRAQARLTAKLEEINSSV
SQLYNQSVRQPQLQSRVVQVDTQIEQLEKKRVYQQRVQEKGQERRNLQERLQENQHTYER
QIAELTQKLEMLKTPDASCPLCDRSLDEHHWNHVVEKTQTQQQEAQQQYWVIREQLAECE
RQREELRQEYRQLSQELAVYESLREQRGELAAQLQASSEVQVRLQQITVEKELLERSLTI
GNYAVDLQDELQELDEYLQELQYDEKTHALARGEAERWRWAEIKQAQLKDAVRRQGLLDA
QKPELLGKIASLETALIELQTNSELAQKLADVQQGIAELNYERSHHNIILASLRQAQSWQ
FRYQELNQAKQQYPEVGDRITLLNQSLQERLTNQQGINHQIEAMVNQLAEMADPTGEIRS
LEQQIQQRRQQLDSYIANLGRLQHQKSQIETLQTQYELQQEQLQEFKRQFRIYDELSKAF
GKNGIQALMIENVLPQLEAETNNILSRLSGNQLHVQFVTQKAGKSTRSRSAKASVKNAKL
IDTLDILIADASGTRPYETYSGGEAFRINFAIRLALARMLAQRSGTALQLLIVDEGFGTQ
DQEGCDRLIAAINAIASDFACILTVTHMPQFKEAFQTRIEVRKTNNGSQLSLLT
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgatccctatccaactcactctcaaaaatttcttcagctaccgcgaagcatctttagat
tttcgcggactgcatactgcttgcatctgtggcgctaatggtgcgggtaagtcttccctt
ttagaagctatcacttgggctatctggggagaaagtcgcgctgctacagaagatgatgtg
attaatgctggtgcgctagaggtgcgcgttgattttgtctttcaatataatcagcaaact
tatcgcgttattcgcactcgtcaaaagggcggtagtggttccctggaatttcagattgaa
accagtaacaacaatttccgctctttgactgaaaaaggggtaagagcaactcaacagcta
attacgggacacctgaagctggattatgatacttttattaattctgcatacttgcgtcaa
ggtagagcagatgagtttatgctcagacgaccaaatgagcgtaaacaaattttggcggat
ttgttgaagttagatcaatatgaagttttggcggaacaagctaaggattcttcgcgccag
tttaaagcgaaggcggaacagttagatctgagtttacaatcaattcaaacacagttgcag
caaaaggaagcgatcgcacttcaacaatctgagattgaaactcaactgcaacaactgcaa
caagttcaagaaattgatcgccaacaactacaacaattacaatcactacaacatcagcgt
caaacttggcaacagcaattaacttggcagcgacagcaatatcagaatcttactcaagat
tgcgatcgcctacaacaagatatcgctaccaaccaaagacaacagcaacaacttgaatct
ttaatcgcacaagaatcacaaattaccacaggttatacagaatacctcaacctgcaagcg
acagaggaagctttggcgggtaagtttcaagcatatcaagatgctcaacaacaaaagcaa
cagttacaacaacagttaactgaaaaaattaatgaaataaatttacaaattcgccagaag
caagcaaagttagaagctttaagtcaacaagaagcagaaattcaagaaactttaaataaa
tcggcggaaattaccaccgctttagaacaattacagcgcagtcgtacccgtcttgctcaa
ttagataaactacaactaaatgtctctcctctgctacaacgtcgcgctaatttacaaact
gaaataaatcgcgctcaggctcgactaactgccaaactagaggaaataaactcctcagtt
tctcagttatataaccagtcagtacgtcaaccacaattacaatctcgcgttgtgcaagta
gatactcaaattgaacaattagagaaaaagcgagtttatcaacagcgagtgcaagaaaaa
gggcaagaaagacggaatcttcaggaacgtctacaggaaaatcaacacacttatgaaaga
caaatagcagaattgacgcaaaaactggaaatgttaaaaacgccagatgctagttgtcca
ttatgcgatcgctctttagatgaacaccactggaatcacgtagtcgaaaaaacccaaact
caacaacaagaagcacaacaacaatattgggttattcgagaacaattagccgaatgtgaa
agacaaagagaagaattaaggcaagaatatcgccaattatcccaagaattagctgtttat
gagtcattgcgagaacaacggggagaactagcagcgcaattgcaagctagcagtgaagta
caggtgaggttgcaacaaataactgttgaaaaagaacttttagagcgatcgcttactatt
ggtaattacgccgttgatttgcaagacgaattgcaagaactcgatgaatacttgcaagaa
ctacaatatgatgaaaaaactcatgctttagctagaggcgaagctgaacgttggcgttgg
gcagaaattaaacaagcacaacttaaagatgctgtacgtcgtcaggggttattagatgca
caaaaaccagaacttttagggaaaattgccagtttagaaactgctttaatagagttgcaa
actaattcagaactagctcaaaaacttgccgatgttcagcaaggtattgctgaactaaat
tatgagcgatcgcaccataacatcatacttgcttccttacgtcaagcgcaatcttggcaa
ttcagatatcaggaattaaaccaagcgaaacagcaatatccagaagtaggcgatcgcatc
accttacttaaccaaagcttacaagaaagattaactaaccaacaaggaattaatcatcaa
atagaagcaatggttaatcagttagcagaaatggcagatcctactggtgaaatccgatct
ttagagcaacaaatccaacagcgaagacagcaattagatagttatatagctaatttagga
agattgcaacatcaaaagagccaaattgaaacattacaaactcaatatgaactacagcaa
gaacaattacaagaatttaaacgtcaatttcgcatttatgatgaattaagtaaagcattt
ggtaagaatggtattcaagcattaatgattgaaaacgtcttaccacaactagaagctgaa
actaataatatcctttcccgtctgagtggaaatcaattgcacgtacaatttgtcactcaa
aaagctggaaaaagtaccagatctcgcagcgccaaagcttcagttaaaaacgccaaatta
attgatacattggatattttaattgctgatgctagcgggacgcgaccttatgaaacttat
tctggcggggaagcatttagaattaactttgcaattcgtttagccttagcgaggatgtta
gcacaaagatctggtacagccttgcaattattaatagtagatgaaggatttgggacacag
gatcaggaaggatgcgatcgcttaattgcagcgataaatgcgatcgcatccgactttgct
tgcatcctcaccgtcacccatatgccccaatttaaagaagcatttcaaacccgcatcgaa
gtccgcaaaaccaataatggatctcagttaagtttgttgacgtaa
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