Crinalium epipsammum: Cri9333_3922
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Entry
Cri9333_3922 CDS
T02373
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cep
Crinalium epipsammum
Brite
KEGG Orthology (KO) [BR:
cep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cep03016
]
Cri9333_3922
Enzymes [BR:
cep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Cri9333_3922
Transfer RNA biogenesis [BR:
cep03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Cri9333_3922
Prokaryotic type
Cri9333_3922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AFZ14731
UniProt:
K9W3F1
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All DBs
Position
complement(4427091..4428029)
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AA seq
312 aa
AA seq
DB search
MQITFLGTSSGVPTRSRNVSSVAIRLPQRAEVWLFDCGEGTQHQLLRSDVKISQIRRIFI
THLHGDHIFGLMGLLASYGLAGNPTAIDIYGPPGLSEYIRASERYSYTHLSYPLKVHTVQ
PGLVYEDEEFLVSCVPLKHRVTAFGYRIVEKDRPGRFNVEQAAALGIPNGPLYGKLKRGE
EVTLSDGRQIRGSDLCAPPEIGRKVVYCTDTVYCDAAVELSQDADVLIHEATFSHQDADM
AFDRLHSTSTMAAQVALGAGVKQLIMTHFSPRYAPGNALVLDDLLQEARAIFPNTALAYD
FLIHEVPRRRGE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaattacctttttaggcactagctcaggtgtaccgacgcgatcgcgcaatgtttcc
agtgttgccatccgtttaccgcaacgggcagaagtttggctttttgactgtggtgaaggt
actcaacaccaattgctgcgtagcgatgtcaaaattagtcaaatcaggcgtatttttatt
actcatctgcatggtgaccacatctttggcttgatgggtttattagcaagctatgggtta
gctggtaatcctactgcaattgatatttatgggccacctggtttaagtgaatatatacgt
gcctctgagcgttattcttatactcatttgtcatacccgctcaaggttcatactgtgcaa
ccaggactcgtctatgaagatgaggaatttttggtcagttgtgtacctttaaaacatcgt
gtgacagcctttggctaccgaattgtagaaaaagaccgccctggaaggtttaatgttgaa
caagctgctgctttgggaatccctaatggccctttgtatggcaagctgaaacgtggtgaa
gaagtcactctatcagatggtcgtcaaattcgcggtagcgatttatgcgctccaccagag
ataggtcgcaaagttgtttattgtacagacacagtttattgtgatgcggctgtggaactg
tcacaggatgcggatgtactaattcacgaagcgacattttcccatcaagatgcggatatg
gcgttcgatcgcttgcactctacctcaacaatggctgctcaggtggcattaggtgctggt
gttaaacagctaatcatgacgcattttagccctcgctatgcccctggtaatgccttggtg
ttggatgatttgcttcaggaagcacgggctattttccctaatacagcactagcttatgat
tttttgatccatgaagttccgcgcaggaggggtgagtag
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