Crinalium epipsammum: Cri9333_4958
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Entry
Cri9333_4958 CDS
T02373
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cep
Crinalium epipsammum
Pathway
cep03420
Nucleotide excision repair
cep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cri9333_4958
03430 Mismatch repair
Cri9333_4958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cep03400
]
Cri9333_4958
Enzymes [BR:
cep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cri9333_4958
DNA repair and recombination proteins [BR:
cep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cri9333_4958
MMR (mismatch excision repair)
Other MMR factors
Cri9333_4958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
UvrD_C
AAA_16
AAA_22
DEAD
Viral_helicase1
ResIII
TPR_2
HigB-like_toxin
TPR_Slam
ANAPC3
TPR_19
Motif
Other DBs
NCBI-ProteinID:
AFZ15713
UniProt:
K9W5T9
LinkDB
All DBs
Position
pCRI9333.06:complement(16408..19695)
Genome browser
AA seq
1095 aa
AA seq
DB search
MSLPAVLHPDVVDFLRTDEQSNLKESVWKCIEKLRQQQFDSGLRVKKLKGIAKKVWEARV
TKAVRLIFTYDKSRTPQTGKAQVYIAVQDICLEHDDVSQRAKARKRTPSAEWLDAEQLEV
IGNLETDSLTLTLAEQSALDAAQVEDLQIPPDFIDELLGNIQWQVVKSEAEWQRAVIQRD
ADLQLKLTPEEYELAHLAENLLLSGSAGTGKTTVAVYRLFQSWQNSPSGKRLYVAYNPLL
VKNAQEQFQRLVNHSNPDIQTTFEFKTIRDLCLEILESSGQSYIAENEVNFQVFDELYRR
KERQQYPPALLWDEIRSIIKGAQLSTTTNVLSRRDYEYLGKKRSTVIPQQQRQEVHKLAE
WYQKQLNQNGLFDEIDLARQVLQRIKKDLGFRYQVIVCDEVQDLTELQIELLFQLLAPQG
QLFFAGDLHQMISPSGFRWEELKQKFYRKQQTVVERTLNFNFRSVGTLVNLANQILKLRY
RLLGSQVRETFQIAGSYGEMGRLITATPEILKLTLRELNSGEAILVRTDIDKEKFRKNFQ
TSLVFTIEEAKGLEFDTVFLVEFFQPKKELWNKVIRGGLLQDKEKPLFLLELNLLYVAIT
RARRILNICESKVSEIWEQPELIGCLISLNSELVKSARVEPTSEIWRKQGLYYLKAEFYQ
QAIECFEKSGDTSLQQNTKAKLLLKQRKHEEAANIFFELQEWGEAARLFEEVKQWQRAAD
CWANVGNRKRQWKCEAQALESDKRWAEVAQRRKWLGEFEVAAKLFQKVEQWQEAANCWAQ
VGNSQNETLCSANALETTRQWEEAAQQWEVLEQPENAKRCWLNSDNEQRKAEYRAIELEN
QGRLNEAAEQYKVAGRTERAEIIRERISGVPKNLSDLYSKLSLEQGMIYLARYIKQYNPA
TYQTKIDAWMRSTSYMVQEQQAIELKRARNFEGAMRIYENLFADQPHFSRIHYSTFKTLA
VANRFDEAYRAMQLWCLAKVISSLMVTTVTSLTSELSIDPRISLQNLYRLPSRDPDAMCH
LGTMNKILSNSLSQASTRAYLRTLAGITSIIEHDRLQAINRGRQVVRNLPWNVIANEIAD
SNTWRHILQANDSIA
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtctctacctgctgtattgcaccctgatgtagttgacttcctccgtactgacgaacag
agtaacttgaaagaaagtgtatggaagtgtatcgaaaagttgagacagcagcagtttgat
agtgggttgcgggtcaaaaaactcaaaggaatagccaagaaggtttgggaagcaagagtt
actaaggctgttcgtcttatttttacttacgacaaatcgaggacacctcagacaggcaaa
gcacaagtctacattgccgttcaagatatctgtttggaacacgatgatgtatctcaacga
gccaaagccagaaagagaacccctagcgccgaatggctggatgctgaacaactagaagtt
attgggaatcttgagactgatagccttactttgactcttgccgaacaatctgcccttgac
gcagcacaagtagaagatttgcaaattccccctgatttcatagatgaacttttgggtaat
atccaatggcaagttgtgaaatcagaagcagagtggcaacgggcagttatccaaagggat
gccgatctgcaattgaagctcacacctgaagaatatgaactagcacatctagctgaaaat
ctccttctatcaggcagtgctggtacaggtaaaactacagtagcagtttaccgacttttc
caaagttggcagaattcgccatcaggtaaacgactatatgttgcctataacccgttgctg
gtgaagaatgcccaagagcaatttcagcgactcgtaaaccatagcaatcctgacattcaa
acgacgtttgagtttaaaaccatacgtgatttatgcttggaaattctagagtcttcgggg
caatcatacattgccgagaatgaagttaacttccaagtcttcgacgaactctaccgccgg
aaagaacgccagcaataccctcctgccctgctttgggatgaaattcgcagcatcattaaa
ggggcgcagctttcaactactactaatgttctctccaggagagattatgaatatttggga
aaaaaacgttctacggtaattccccaacagcagcggcaggaagttcataagctggctgaa
tggtatcaaaagcagttgaatcagaatggattgtttgatgaaattgacttagcgcgtcaa
gtgctgcaaagaatcaaaaaggatctaggtttccgttaccaagtaattgtctgcgatgaa
gtacaggatttgactgagttacagatagagcttttgtttcaactcttagccccacaggga
cagcttttttttgctggggatttgcatcagatgattagccccagcggttttcgttgggaa
gaactcaaacagaagttttacaggaaacaacagacagtcgttgagagaacattaaatttc
aattttcgcagtgttggcacgctggttaatttagctaatcaaattctgaaattacgttat
aggctgctgggcagtcaagtaagggaaacttttcagattgcgggaagctacggagagatg
gggcgcttgataacagctactccagaaatactgaagctaacattaagagaattaaattca
ggggaagctatcttagttaggactgatattgataaagaaaaatttcgcaagaatttccaa
actagcttagtttttactatagaagaagctaaaggactagagtttgatacggtttttttg
gttgagttttttcaaccaaaaaaagaactttggaataaagtaattaggggtggtttgcta
caagataaagaaaaaccattattcctactagagttaaacctactgtatgtagctattacc
cgtgctagacgtatcttaaatatttgtgagtcaaaagtttctgaaatttgggagcagcca
gaattaataggttgtctaatttcgctgaattctgaattagtaaaaagcgctcgcgttgag
cctacatcagagatctggcgcaaacaagggctttattatctgaaggctgagttttatcaa
caagctatcgagtgctttgaaaagtcgggtgatacatcgctacaacaaaacactaaggcg
aagcttctactgaaacaacgaaagcacgaggaagcagctaatattttttttgagttgcaa
gaatggggagaggcggcgcggttgtttgaagaagtgaagcagtggcaacgtgcagcggat
tgttgggcaaatgtcggtaatagaaaaaggcaatggaaatgtgaagcacaggcactagaa
tctgataaacggtgggcagaagtagcgcaacgacggaaatggctcggagaatttgaagtt
gctgctaaattatttcagaaggtagagcagtggcaggaagcagccaactgctgggcgcaa
gttggtaattctcaaaacgaaacactttgtagtgccaacgcgctagagactacaagacag
tgggaagaagcagcacaacagtgggaagtattagaacagccagaaaatgccaagcgctgc
tggttaaatagtgacaatgaacagaggaaagcagaatacagagcgattgaattggaaaat
caaggtcgattaaatgaggcagcagaacagtataaggtagcaggaagaacagagagggct
gaaattatcagggagagaattagcggtgtacctaaaaacttatcagatctttattcaaag
ctttctttagagcagggaatgatctacctggcgcgttatatcaaacaatacaatccagcc
acctatcagacaaaaattgatgcttggatgagaagtacaagctacatggtgcaggaacag
caagcaattgaactaaaacgagcgaggaactttgaaggagcaatgagaatttacgaaaat
ctgtttgctgatcaaccccacttttcccgtatccactacagtaccttcaaaacgttagca
gtcgctaaccgattcgacgaggcttatcgggctatgcaactttggtgtttagctaaggtt
atcagtagtcttatggtaactaccgttacttctttaacttcagaactgagcatagatccg
cgtatttctctacaaaatttatatcggttgccaagtcgagaccctgacgctatgtgtcat
ttaggtacaatgaataagatcttgtctaatagcttaagtcaagctagtacccgtgcttat
ttaagaacgttagctggaataacttcaattattgaacatgatagattacaagcaattaat
aggggaagacaggtagttcgtaatttaccttggaatgtaattgctaatgaaatagctgat
agtaatacttggagacatattctccaagcaaatgatagtattgcttag
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