Coxiella-like endosymbiont of Amblyomma americanum: B1F76_03025
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Entry
B1F76_03025 CDS
T07659
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ceq
Coxiella-like endosymbiont of Amblyomma americanum
Pathway
ceq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ceq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1F76_03025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ceq03021
]
B1F76_03025
03019 Messenger RNA biogenesis [BR:
ceq03019
]
B1F76_03025
Transcription machinery [BR:
ceq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
B1F76_03025
Messenger RNA biogenesis [BR:
ceq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B1F76_03025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
S1CSD-TOTE-2
AAA_25
AAA_22
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AUJ58997
LinkDB
All DBs
Position
complement(649248..650504)
Genome browser
AA seq
418 aa
AA seq
DB search
MNLTELKQKSVAELMEIAHVMDLEHVSRSRKQDIIFAVLKSHAKKGEDIFGDGVLEILQD
GFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLQVNQIN
LEKPEASKGKILFENLTPLFPNEKIQMEIGNGSTEDITARIIDLVAPIGKGQRGLIVSPP
KAGKTMMLQNIAHSITGNHSECILIVLLIDERPEEVTEMDRSVKGEVVASTFDEPAARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPTSGKVLTGGVDANALQRPKRF
FGAARNIEECGSLTIIATTLIETGSKMDDVIYEEFKGTGNMEIHLDRRIAEKRIFPAINI
NRSGTRREELMMKQDILQKVWILRKILHPMDEVAASEFLIERLKLTKTNNDFFDSMKS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgactgagcttaaacaaaaatcagttgcggaattaatggaaattgcccatgtg
atggatttagaacacgtatctcgttctcgaaaacaagatattatttttgcagtcttaaaa
tcacacgctaaaaagggagaagatatttttggtgatggtgtattagaaattctccaagat
ggttttggatttttacgttcctctgatagttcttatttagctggtcctgatgatatttat
gtttctcctagtcaaattcgaaggtttaatttacgcactggagatactatttctggaaaa
attcgacctcctaaagaaggagaacgttattttgctttattgcaagttaaccagatcaat
ttagaaaaaccagaagcttctaaaggaaaaatcctgtttgaaaatcttacaccacttttt
ccaaatgaaaagattcaaatggagataggaaatggtagcacagaagatattacggctcga
attatcgacttagtagcacccattgggaaaggtcaacgtggtttaattgtatcaccacct
aaagcaggcaaaaccatgatgttgcaaaatattgctcattctattactgggaatcactct
gaatgtatactaatcgtattattaattgatgagcgacctgaagaggtaacggaaatggat
cgttctgtaaaaggagaagtggtagccagtacttttgacgagcctgctgctcgtcatgta
caagtggcagaaatggttattgaaaaagcaaaacgtcttgtagagcataaaaaagatgtc
gtcattttactcgattccataactcgactagcacgtgcttataacaccgtaatcccaact
tcagggaaagttttaacaggtggtgtggatgcaaatgcattacagcgtccaaaacgcttc
tttggagccgcacgtaatatcgaagaatgcggtagcttaacgatcattgcaactaccttg
attgaaactgggtccaaaatggatgatgtaatttacgaggaatttaagggcacaggaaat
atggaaatccatttagatcgtcgtattgccgagaaacgaatatttcctgctattaatatt
aatcgttccggaacacgacgagaagaattaatgatgaaacaagatattctacagaaagta
tggatcttacgaaaaattctacatcctatggatgaagtagcagcaagcgaatttttaatc
gagcgattaaaactaacaaaaacaaataacgacttctttgattcgatgaaaagttga
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