Cutibacterium equinum: O6R08_06710
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Entry
O6R08_06710 CDS
T09514
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cequ
Cutibacterium equinum
Pathway
cequ03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cequ00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6R08_06710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cequ03019
]
O6R08_06710
Messenger RNA biogenesis [BR:
cequ03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
O6R08_06710
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
WCC79235
UniProt:
A0ABY7QX35
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Position
complement(1457729..1459420)
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AA seq
563 aa
AA seq
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MPETGLTPPPDLQPDVLRIIPLGGLGDVGRNMSCYEINGEMLLIDCGVLFPEDDHPGVDL
LLPGLDYLDEDKLSRVKALVLTHGHEDHIGAVPYLLKRRPDIPIYGSKLTLALVEAKLRE
HRIKGYQLNVVHEGDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGTLINTGDFKMDQL
PLDGRITDLRAFVRLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKANKKLIVA
CFASHVHRVQQVLNMAVRHNRKVCYVGRSMVRNMAVAQELGYLHVPDNTVIELRELDHYR
DDEVVIISTGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLT
KLGATVVHKGNALVHVSGHAAAGELLYVYNIVRPRAVMPIHGEVRHLVANADLAKATGVD
EKNIVLVEDGGVVDLVEGVPRVVGKVDASYILVDGSGVGELTEDTLTDRRILGEEGFLSV
VTVVDTRSASVVSRPAIQARGFAEDDSAFAAVTDQIVSELEKAMSDGMDDTHRLQQVVRR
TIGRWVSQTFRRRPMIVPVVVKI
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagactggattgacgccacccccggacctgcaacctgacgtattgcgcatcatc
cccctaggaggcctgggggacgttggacgcaatatgtcgtgctacgagatcaatggggag
atgctcctcattgactgtggggtgctcttccccgaggacgaccatccgggagttgacctg
ctgcttcccggcctggactacctcgatgaggacaagctctcccgtgtcaaggctctggta
ctcactcacggccacgaggaccacatcggggctgtgccttatctgctgaagcgtcgcccc
gacatcccgatctacgggtccaagctgaccttggcgctggttgaggcgaaactgcgtgag
catcgcatcaagggataccagctcaatgtcgtccacgagggcgacgtcgccgaggtgggc
gagcagttcgacctggagttcattgccgtcaatcactcgatccccgatgccctggcggtg
tgcgtgcgcaccgacgcgggaaccctcatcaataccggcgacttcaagatggaccagttg
ccgctggatgggcgcatcaccgacctgcgtgccttcgtgcgtctcggggaagaaggcgtc
gacctgttcatggtcgattccaccaatgccgaggtgccgggcttcgtcaagtccgagacc
gagatcgagccggccatcgagagggtgttcgagaaggcgaacaagaagctcatcgtcgcc
tgtttcgcctctcacgtgcatcgcgtccagcaggtcctcaacatggccgtccgtcacaac
cgcaaggtctgttacgtcggtcgttccatggtccgaaacatggccgtggcccaggagctt
ggttacctccatgtgccggacaacaccgtcatcgagctgcgtgagcttgatcattaccgc
gacgacgaggtggtcatcatctcgaccgggtcccagggggagccgctgtcagccctggct
cgcatcgccaaccgcgagcaccgcgacatcgaggtgggggagggcgacaccgttctcctg
gcatcctccctcattcctggaaacgagaacgccgtctaccgtgtcatcaacggtctgacg
aagctcggtgcgaccgtcgtccacaagggcaatgccctggtccacgtctccgggcacgcg
gcggccggcgagctgctgtatgtctacaacatcgtgcgtccgcgtgcggtcatgccgatt
cacggtgaggtgcgtcatctcgtcgccaacgccgacctggccaaggccaccggagtcgat
gagaagaacattgtcctcgtcgaggatggtggggtcgtcgacctggtcgagggggtgccg
cgggtcgtcggcaaggttgatgcgtcgtacatcctcgttgacggctccggtgtcggtgaa
ctcaccgaagacaccctcactgaccgtcgcatccttggcgaggagggattcttgtcggtg
gtcactgtggtcgacacccgttcggcctcggtggtgtcgcgtccggcgatccaggcacgc
ggcttcgccgaggacgattcggccttcgctgcggtcaccgatcagatcgtctctgagctg
gagaaggccatgtcggacggtatggacgacactcaccggctgcagcaggtggtgcgccga
accattggacggtgggtctcccagaccttccgccgtcgtcccatgatcgtgccggtggtc
gtcaagatctga
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