Cutibacterium equinum: O6R08_08595
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Entry
O6R08_08595 CDS
T09514
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cequ
Cutibacterium equinum
Pathway
cequ03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cequ00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O6R08_08595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cequ03021
]
O6R08_08595
03400 DNA repair and recombination proteins [BR:
cequ03400
]
O6R08_08595
Enzymes [BR:
cequ01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O6R08_08595
Transcription machinery [BR:
cequ03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
O6R08_08595
DNA repair and recombination proteins [BR:
cequ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
O6R08_08595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WCC79559
LinkDB
All DBs
Position
complement(1882917..1886798)
Genome browser
AA seq
1293 aa
AA seq
DB search
MLDTNYYDRLQIGLATADQIRAWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIVCERCGVEVTRSNVRRERMGHIELVAPVTHIWYFKGVPSRLGYLLDI
APKDLEKVIYFAAYMITAVDEEARHRDLPSLEAKVQTERSRMEQRRDSELEARRVKLEED
MAQLEADGAKADIRRKVKDGAEKELKHIETRAQRQIDRLDAVWDRFKNLKVQDLEGDEIL
YREMKSRFGKYFEGSMGAEAIKRRLHDFDLAAEAENLREVIKTGRGQKKTRALKRLKVVQ
AFLESGNSPEGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLVDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVSGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKMHQCGLPKTMALELFKPFVMKRLADLEHAQNVKSAKRMVERQR
PVVWDVLEEVIKEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCSAFNADFDGDQ
MAVHLPLSPEAQAEARVLMLSTNNILKPADGRPVALPSHEMIIGAYYLTMALDGLKGEGR
AFASLAEAIMAHDLGELEIGAKIKLRLHGVVPPHGETVRADGSVILDTTLGQALFNEVLP
ADYPYVDYLVGKKQLGKIVNDLSERMTQLEVAHVLDSLKDIGYKWGSLSGVTVSIGDVQT
PPTKPEILAGYEARAAKVDREYDRGAVTEEERRQDLIQIWTEATAELTAAMEANFTQTNP
IHMMVDSGARGSMTQMRQIAAMRGLVADPKGDIIPRPIKSNFREGLTVLEYFISTHGGRK
GQADTALRTADSGYLTRRLVDVSQDVIVREEDCGTTRGMPKTIAVDDGTGALVRVEGLDT
AVYARCLAADAVDANGNVVVEANSDLGDEEISKLIAAGISQVKVRSVLTCTAAQGCCARC
YGRSLSTGHLVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVVELFEA
RSPKGKSPLAEAAGVIRIEESDNRRKLILVRDDGEDDVEYVVPRRARLEFDLDGTHRVIR
DGVRVAAGEQLMGGTADPQDVLRISGVRRVQEYLVKEVQKVYNTQGAGIHEKHIEIVIRQ
MLRRITVIESGDTQMMPGELVDRTSYENANRKAVAEGGRPAEGRPVLMGITKASLATESW
LSAASFQETTKVLTDAAINGKTDTLVGLKENVILGKLIPAGTGLEIYRNLRVEPTAEAKA
AAFTMNYDPFDYDFGSGSGAAVPLDDLDLGDLG
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacaccaactactacgatcggttgcagatcggcctggccacggccgaccagatc
cgtgcgtggagccacggcgaggtcaagaagcctgagaccatcaactaccgcaccctcaag
cccgagcgtgacggcctcttctgcgagaagatcttcggcccgacccgtgactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcgtctgtgagcgctgcggcgtc
gaggtgacccgttccaacgtgcgtcgtgagcgcatgggacacattgagctggtcgccccg
gtgacccacatctggtacttcaagggagttccctcccgtctgggttacctgctcgacatc
gccccgaaggatctggagaaggtcatctacttcgcggcgtacatgattaccgccgtcgac
gaggaggctcgtcaccgcgacctgccgtcgctggaggccaaggtacagaccgagcgctcc
cgcatggagcagcgtcgtgattccgagcttgaggcccgccgggtcaagcttgaggaggac
atggctcagctcgaggccgacggtgccaaggctgacatccgccgcaaggtcaaggacggc
gccgagaaggagctcaagcacatcgagacccgcgcccagcgccagatcgatcgtctcgac
gccgtgtgggatcgtttcaagaacctcaaggtccaggatcttgagggtgacgagatcctg
taccgggagatgaagtcgcgtttcggcaagtacttcgaggggtcgatgggtgccgaggcc
atcaagcgtcgtctccacgacttcgacctggctgccgaggccgagaatctgcgcgaggtc
atcaagactggccgtggccagaagaagacccgcgccctcaagcgtctcaaggtggtgcag
gccttcctcgagtccggcaactcgccggagggcatggtcctggactgcgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgccacctcggacctc
aacgacctctaccgtcgcgtcatcaaccgaaacaatcgcctcaagaggctggttgacctc
ggcgccccggagatcatcgtcaacaacgagaagcgaatgctccaggaggccgtcgactcc
ttgttcgacaacggtcgtcgtggacgtccggtgagtgggccgggtaaccgtccgctcaag
tcgttgtctgacatgctcaagggcaagcaggggcgtttccgtcagaacctgctcggtaag
cgcgtcgactactcgggtcgttcggtcatcgtcgtcggcccgcagctcaagatgcaccag
tgcggtctgcccaagacgatggctctggagctgttcaagcccttcgtcatgaagcgtctg
gctgacctggagcacgcccagaacgtcaagtcggccaagcgcatggtcgagcgccagcgt
ccggtggtgtgggatgtcctcgaggaggtcatcaaggagcacccggttctgttgaaccgt
gcacctaccctgcaccgtctgggtattcaggccttcgagccccagctcatcgagggtaag
gccatccagttgcatccgctcgtctgctcggccttcaacgctgacttcgacggtgaccag
atggctgtgcacctgccgctgagcccggaggcccaggctgaggcccgcgttctcatgctg
tcgaccaacaacatcctcaagccggctgacggccgcccggtcgccctgccctcgcacgag
atgatcatcggcgcctactacctgacgatggcccttgacggcctcaagggtgagggacgt
gccttcgcctctctggccgaggcgatcatggctcatgacctgggtgagcttgagatcggc
gccaagatcaagctgcgtctgcacggcgtcgtcccgccgcacggtgagacggtgcgcgct
gacggttcggtcatcctcgacaccacgttggggcaggctctgttcaacgaggtgctgccc
gctgactacccgtacgtcgactacctcgtcggtaagaagcagctcggcaagatcgtcaat
gacctgtccgagcggatgacccagcttgaggtggcccacgttctcgacagcctcaaggac
atcggttacaagtggggctcgctgtctggcgtgaccgtctccatcggtgacgttcagacc
ccgccgaccaagccggagattttggccgggtatgaggcccgcgccgccaaggttgaccgt
gagtacgaccgtggtgccgtgaccgaggaggagcgtcgtcaggacctcatccagatctgg
accgaggccactgccgagctgaccgccgccatggaggccaacttcacccagaccaacccg
attcacatgatggttgactcgggtgctcgaggcagtatgacccagatgcgtcagatcgcg
gccatgcgtggtttggtggctgacccgaagggtgacatcattccgcgcccgatcaagtcg
aacttccgtgagggcctgacggttctggagtacttcatctccacccacggtggtcgtaag
ggacaggctgacaccgctctgcgtaccgcagactcgggttacctgactcgtcgtctggtg
gacgtgtcccaggatgtcatcgtccgcgaggaggactgcggcaccacccgtggcatgccc
aagaccattgccgttgatgacggcacgggcgccttggtgcgcgtcgagggcctggacact
gcggtgtatgcccgctgcctggctgccgatgccgttgacgccaatggcaatgtcgtggtc
gaggccaactccgatctgggtgacgaggagatttccaagctcatcgccgctggcatctcg
caggtcaaggtgcgttcggtgctcacctgcaccgccgcgcagggctgctgtgcccgttgc
tatggacgttcgctgtcgaccggccatctggttgacgtcggcgaggccgtcggtatcatc
gctgcccagtcgatcggtgagcccggtacccagttgacgatgcgtaccttccacaccggt
ggtgtcgctggtgacgacatcactcagggtcttccccgtgtcgtcgagcttttcgaggcc
cgtagcccgaagggtaagtcgccgctggccgaggccgctggtgtcatccgcatcgaggag
tccgacaaccgccgcaagctcatcctggtccgtgacgacggcgaggacgacgtggagtac
gtggtgccgcgtcgtgcccgtctggagttcgaccttgacggtacccaccgcgtcatccgt
gacggtgtgcgtgtggccgctggtgagcagctcatgggtggtaccgccgacccgcaggac
gtcctgcgcatctccggtgttcgccgggtgcaggagtacctcgtcaaggaggtccagaag
gtctacaacacccagggtgctggtattcacgagaagcacatcgagatcgtcattcgtcag
atgctgcgccgtatcaccgtcattgagtccggtgacacccagatgatgcctggcgagctg
gtggaccgtacctcgtacgagaacgccaaccgcaaggctgtcgccgagggtggtcgtccg
gctgagggtcgtccggtgctcatgggtatcacgaaggcctcgttggccacggagtcctgg
ctgtcggctgcttccttccaggagacgacgaaggtgctcaccgatgccgccatcaacggc
aagacggacactctggtcggcctcaaggagaacgtcatcctcggtaagctcatcccggcc
ggtacgggtctggagatttaccgcaatcttcgggtggagccgaccgcggaggccaaggct
gccgcgttcaccatgaactacgacccgttcgactatgacttcggttcaggatcgggtgcg
gctgttccgctcgacgatctggatctgggtgatctgggctga
DBGET
integrated database retrieval system
