Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_0015
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Entry
RGRSB_0015 CDS
T05747
Symbol
clpC
Name
(GenBank) ATP-dependent Clp protease regulatory subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cer03110
]
RGRSB_0015 (clpC)
Chaperones and folding catalysts [BR:
cer03110
]
Heat shock proteins
HSP100
RGRSB_0015 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
TniB
AAA_18
AAA_28
UVR
AAA_14
IstB_IS21
Zeta_toxin
TsaE
Mg_chelatase
AAA_25
AAA_3
ATPase_2
AAA_23
NACHT
Torsin
SYCP2_ARLD
NBD_SMAX1
DAHP_snth_FXD
Motif
Other DBs
NCBI-ProteinID:
BBA78655
UniProt:
A0A2Z5TGP3
LinkDB
All DBs
Position
complement(24108..26576)
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AA seq
822 aa
AA seq
DB search
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR
VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA
ARVLENLGVDLSKVRTQVIRQLGETAEVAAGGGPSGRTKTPTLDEFGSNLTNMAGEGKLD
PVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIATKDVPDILEEKRVV
TLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANIL
KPALARGELQCVGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRERYEQ
HHKLKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKEL
RSILKQKDDAVRAQDFDKAGELRDREMEIKEEIRSISSAKKAEGDSDEPFVDSEEIAHIV
ASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIAS
FVFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGG
QLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNI
GSKVIEKGGGGLGFEFEENKTEAQYNRIRALVNEELKNYFRPEFLNRLDEIIVFRQLDKN
EVKEISEILLKEVFARLTEKSITLNVTDNFKERLVEEGYNPAYGARPLRRAIMRLLEDVL
AEEILSGRVGEGDTALVDIDEDGKVKVIPNEKKQDLLAKATD
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacgctttacagaaaaagctatcaaggtcataatgctggctcaagaagaggcc
cgccgtctcggacacaactttgtcgggacggaacagattcttctggggctaattggtgaa
ggaactggggtagcggccaaagttctcaagtccatgggtgtcaacctcaaagacgcccgc
gttgaggtcgaaaaaattattggacgtggttcagggtttgtcgccgtcgaaattcctttt
accccaagagctaaaagagtccttgaactctcattagaagaagctcgacaactcggacat
aactacattggaaccgaacatcttcttttagggttaatccgtgaaggagaaggtgtagcc
gcacgagttcttgaaaatttaggagtagatttgtccaaagttcggactcaagtgattcga
caacttggagaaacagctgaagtagctgctgggggaggtccatctggacgaactaaaact
ccaactctcgatgaatttggttctaatctgaccaatatggctggagaaggaaaacttgat
ccagtagtaggacgacaaaaagaaattgaacgggtgatccaaattcttggtcgtagaact
aagaacaatcccgttttaattggagaaccaggagtaggaaaaactgcaattgccgaaggt
cttgctcagcgtattgccaccaaagatgtccccgatatcctcgaagaaaaacgagtagtt
accctcgatattggcttgctagtggccggaactaagtatcgtggggaatttgaagaacgt
ctaaagaaaatcatggacgaaattcgtcaggctggaaatgtgattttagtaattgacgaa
gtgcatactctcatcggtgcaggagcggctgaaggggcaattgatgcggctaatattctt
aaaccagctttagcacggggagaattacagtgtgtcggagctaccactctcgacgaatac
cgaaaacacatcgagcgggatgcagccttagaacgtcgtttccaaccagttatggtgggt
gagccctctgttgacgaaaccattgagattctctatgggttacgggaacgttatgaacaa
caccataagttaaagatccttgatgaagctctggaagctgccgctaagctttcagaccgc
tatatttcagaccgctaccttcctgataaggcgatcgatctcattgatgaagcaggatcg
cgggtaaggttaattaattcccaactacctccagcagctaaggaacttgacaaagagctt
cgttctatccttaaacaaaaagacgatgcagtccgagctcaagactttgataaagctgga
gaactgcgtgatcgtgaaatggaaattaaagaggaaattcgatcaatctcctccgcaaag
aaagcagaaggggacagtgatgaaccctttgtagactcggaggagatcgcccatattgtc
gcctcttggactggagttccagtgaacaaactgacggagactgaatccgaaaagttgctc
cacatggaagataccttacaccaacgtttgattggtcaagaagatgcggtgaaagcggtg
tcgcgagcaattcgccgggcaagagttggtctgaaaaaccctaatcgtcccattgctagt
tttgtcttttctggacctactggagtaggtaagactgagttgactaaggcattagctgct
tatttctttggttcagaagatgccatgatccgtctagatatgtctgaatatatggaacgc
catacagtatctaagttaattggatctcctcctggatatgtgggttataacgaagggggc
cagttaaccgaagcagtgcgccgtcgtccttatacagtggttctttttgacgaaattgag
aaagcacaccctgatgtctttaatatgcttttgcaaatcctagaagacggtcgccttact
gacgctaagggtcgtacagtagactttaaaaacactctgttgatcatgacctctaatatc
gggtctaaagtgattgaaaaaggtggcggcggactcggatttgagtttgaagaaaataaa
acggaggctcaatataatcggattcgagctttggttaatgaggaattgaagaattacttc
cgtcctgaattcctcaaccgtctcgatgaaattattgtcttccgtcagttagataagaat
gaggttaaggaaatctctgaaattctccttaaagaagtctttgctcggttgactgaaaag
agcattactttgaatgttactgacaatttcaaagaacgtttggtggaagaggggtataac
cccgcttatggggcgcgacctttgcgtcgtgccattatgcgtctccttgaagatgtctta
gctgaggagattctttcaggccgagttggtgagggagataccgcattagtagacattgat
gaagatggcaaagttaaggttataccaaacgaaaaaaagcaggatctgttagctaaggct
acagattaa
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