Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_0041
Help
Entry
RGRSB_0041 CDS
T05747
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer00730
Thiamine metabolism
cer00900
Terpenoid backbone biosynthesis
cer01100
Metabolic pathways
cer01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RGRSB_0041 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RGRSB_0041 (dxs)
Enzymes [BR:
cer01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
RGRSB_0041 (dxs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_N
TPP_enzyme_C
Transketolase_C_1
E1_dh
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
BBA78677
UniProt:
A0A2Z5T1C5
LinkDB
All DBs
Position
66909..68819
Genome browser
AA seq
636 aa
AA seq
DB search
MHISEITHPNQLHGLSLRQLEDISRQIREKHLQTIAASGGHLGPGLGVVELTVALYQTLD
LDRDKVTWDVGHQAYPHKMLTGRYNRFHTLRQKDGIAGYLKRCESQFDHFGAGHASTSIS
AALGMALARDAQGENHKVVAVIGDGALTGGMALEAINHAGHLPNTNLMVVLNDNEMSISP
NVGAISRYLNKVRLSDPVQFLSDNLEEQFKQFPFFGESFTPEMERVKEGIKRLAVPKVGA
VIEELGFKYFGPIDGHNLEELIGTFKQAHKVSGPVLVHVATVKGKGYDLAEKDQVGYHAQ
SPFNLATGKAHPSSKPKPPSYSKVFAHTLTKLAENNPKIIGITAAMATGTGLAKLYAKLP
KQYIDVGIAEQHAVTLAAGLACEGMRPVVAIYSTFLQRAYDQVLHDVCIQNLPVFLCLDR
AGIVGADGPTHQGMYDIAYLRCIPNLTIMAPKDEAELQRMVVTGVYHTDGPIAMRYPRGS
GIGVPLMEEGWEPLSIGKGEILRTGDDVLLLGYGSMVNTALQVAEILGEYGIEATVVNAR
FVKPLDTELIFPLARRIGRIATLEEGCLIGGFGSAVAEVLSDNGILIPLKRFGVSDHLVD
HATPDQSKADLGLTSPQIVEQILQVFFKSPQPSVIS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcacataagtgaaatcactcatcccaaccagttacatggtttatcactccgacaacta
gaagatattagtcgtcaaattcgagaaaagcatttacaaacgatcgccgctagtggagga
catctaggtcctgggttaggagtagtagaactcactgtcgctctttatcaaaccctagat
ttggatcgggataaagttacctgggatgtaggacaccaagcttacccccataaaatgtta
actggtcgttataatcgtttccacaccctaaggcaaaaagacggtattgccggatatcta
aaacgttgcgaaagtcaattcgatcattttggagccggacacgcttctacaagtatttct
gccgctttaggtatggcattagccagagatgctcaaggggaaaatcataaagttgtagca
gtgattggagatggagcattaactggaggaatggccttagaagctatcaaccatgctgga
catttacccaacacaaatcttatggttgtactcaacgacaatgaaatgtctatttctcca
aacgtgggagctatttctcgctacctcaacaaggtacgtttgagtgatcccgttcaattt
ctctcagacaacctcgaagaacaatttaaacaatttcctttctttggggaatcttttacc
cccgaaatggaaagggttaaagaaggaataaaacgtctagcagttcctaaagtgggtgca
gtaattgaagaattaggctttaaatattttggtccaattgacggacacaatttagaagag
ttaattggcaccttcaaacaggcccacaaagtctccggtccagttcttgttcatgttgct
actgtcaaaggaaaaggttatgacttagctgaaaaagaccaggtaggctaccatgctcaa
agtccctttaacttagctactggcaaggctcatccatccagtaaacctaaacctcccagt
tattctaaagtttttgctcatactctcactaaactagctgaaaacaatcctaaaattatt
ggaattactgcagctatggctacgggaacaggattagctaaactttatgctaaacttcct
aaacaatacattgatgtaggaatcgctgaacaacatgccgtcaccttagctgctggtctt
gcttgtgaaggaatgcgtcccgttgtagctatttactcaacatttttgcaaagagcttac
gaccaagttcttcatgatgtttgtattcaaaaccttcccgttttcttgtgtcttgatcgc
gctggaattgtcggcgcagatggacctactcaccaaggaatgtacgacatcgcctatcta
cggtgtattcctaacttgactatcatggctcccaaagacgaagcggaattacaacgaatg
gtagtgacaggagtctatcacactgatggaccgatcgctatgcgttatcctcgtggtagc
ggtattggagttcctttaatggaagaaggttgggaacccttatccataggtaaaggagaa
attctccgtactggagatgatgttttacttttaggttatggctccatggtaaatacagcc
ttacaagtagcagaaattcttggagaatatggcattgaagcaacagtagttaatgcccgt
tttgttaaacccttagatacggaattaatctttcccctcgctcgacgcattggaagaata
gctaccttagaagaaggttgtctcatcggtggtttcggttcagcagtagctgaagtcttg
tctgataatggcatcctaattcccttgaaacgatttggtgtgagcgatcatctagttgat
catgccacccctgatcaatccaaagcagatttagggttaaccagtcctcaaattgtcgaa
caaattctacaggttttttttaaaagtccccaaccttccgtaattagttaa
DBGET
integrated database retrieval system
