Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_0052
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Entry
RGRSB_0052 CDS
T05747
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RGRSB_0052
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cer02000
]
RGRSB_0052
Transporters [BR:
cer02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RGRSB_0052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_18
AAA_22
NB-ARC
AAA_29
RsgA_GTPase
AAA_24
AAA_PrkA
NACHT
AAA_28
MMR_HSR1
AAA_25
AAA_5
dNK
Mg_chelatase
nSTAND3
TsaE
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
BBA78688
LinkDB
All DBs
Position
81635..83380
Genome browser
AA seq
581 aa
AA seq
DB search
MATSRLRQLGKYLYPHWKQVLWGTGTLFVVNALGVYIPLLIRDSIDDLRQAFSFDQVLLY
VVLMLILATIMWIVRMISRLIIFGVGRQVEFDLKQRIFEHLLTLEPAYFSTNTGGDLINR
ATSDVDNIRRLVGFAVLSLINIIFAYALTLPAMLSIHVPLSLLAIAVYPVILFTVQIFSR
HLQNQQFKVQEGLSEISELIQEDIGGMALIKIYAQEANEIRAFDQLNQELLKANLKLAKI
RNFLFPIIEGLSYISLLLLLTFGTQAITEGTISIGDFVALIILVEQLVFPTALLGFTMTA
YQRGEVSIDRIAAIFQAQPRVHDQYQLKSISPSEIKGKLVALNLSYTYPGAKKPALNKVN
MTINPGETVAIVGPIGCGKSTLANTLPRLLEIAPGQLFLDDYDVTELPLAQLRRAIAYVP
QDSFLFNTSIENNIRYGDHLKERYEVEWAAKQSQIHQEIMNLPQKYDTLVGERGIILSGG
QRQRTALARALLMDASILILDDALSSVDNKTATQILNSLYKEQGKTIIFISHHLPAAAQA
DRILVMDKGRIVQMGTHKTLLQQPGLYQSLWNQHQLEKMCN
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgtcacgacttcgacaactgggtaaatatttatatcctcactggaaacaagtg
ttgtggggaacaggcacattatttgttgttaacgctctaggggtttatattcccttacta
attcgagatagtatcgacgatttgcgtcaggcatttagttttgatcaagtattattatat
gttgtcctaatgttaattctagcgactattatgtggatagttcgcatgatctcgcgcctt
ataatttttggagtgggtcgtcaggtagaatttgatcttaaacaaaggatattcgaacat
ttactcaccctagaacctgcctatttttccactaataccggcggcgatttaattaaccgt
gccaccagtgatgtagataatattcgtcgtttggtgggcttcgcagtattgagtttaatt
aatataatttttgcttacgctctgactcttccggcgatgttgtctatccacgttccctta
agtttattggctattgctgtctatccagtaattctgtttacagtacaaatattcagtaga
catttacaaaatcaacaatttaaggtgcaagaaggactgtctgagattagtgagttaatc
caagaagatatcggtggcatggctttaattaaaatttatgcccaagaagctaatgaaatt
cgtgcttttgatcaactaaaccaagaactgctaaaggctaacttaaaactcgccaaaatt
cgtaattttcttttccctatcattgaaggactatcatatatcagcctattactgctgtta
acttttggaactcaagcaatcactgaaggaaccatcagtatcggagattttgttgctcta
attattttagtagaacaattagtgtttcccacggccttgctgggatttacaatgactgcc
tatcaacggggagaagtgagtattgatcgaatagcagccatctttcaagcacaaccgaga
gttcacgatcaataccaacttaaatctatctccccatcagagattaaaggtaaattggtt
gcccttaacctcagctatacttatcctggggcgaaaaaaccagctttgaataaagttaac
atgacgatcaatcctggagaaacggtagccattgttggtccaattggttgcggaaaatca
accttagccaatactttaccccgtttacttgaaattgcgccaggacaattatttttagat
gattatgatgtcaccgagttacctttagcccaattacggagggcaatcgcctatgttcct
caggatagcttcttgtttaatacttctattgaaaacaatattcgttacggagatcatctt
aaggaacgatatgaagtagaatgggcagctaaacaaagccagattcatcaagagattatg
aatctacctcaaaaatatgatactctcgttggagaaaggggtattattctttcaggtggt
caacgacaacgtactgctctagctagagctttattgatggatgcttcaatactaatctta
gacgatgctctatcaagtgttgataataaaactgctacccagattctaaatagtctttat
aaggaacagggtaagactattatttttatttctcatcatttaccagctgcagcgcaagca
gaccgtattttagttatggataaaggaagaattgttcagatgggaacccataaaaccttg
ttgcaacaacctggattgtatcagtctctttggaatcaacatcaattagagaaaatgtgc
aactag
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